RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 GABBR1Q9UBS5 961 aa8.4□□□□□ -1.06
CDKL5-202ENST00000379996 SEL1LQ9UBV2 794 aa8.4□□□□□ -1.06
CDKL5-202ENST00000379996 DDX20Q9UHI6 824 aaKnown RBP8.4□□□□□ -1.06
CDKL5-202ENST00000379996 KCNG1Q9UIX4 513 aa8.4□□□□□ -1.06
CDKL5-202ENST00000379996 PCDHGC5Q9Y5F6 944 aa8.4□□□□□ -1.06
CDKL5-202ENST00000379996 GRIN2DO15399 1336 aa8.4□□□□□ -1.06
CDKL5-202ENST00000379996 UBE4BO95155 1302 aa8.4□□□□□ -1.06
CDKL5-202ENST00000379996 ZMYM2Q9UBW7 1377 aa8.4□□□□□ -1.06
CDKL5-202ENST00000379996 LGALS2P05162 132 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 GRK4P32298 578 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 ACTN2P35609 894 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 STAT5BP51692 787 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 PTPN11Q06124 597 aaPredicted RBP8.4□□□□□ -1.07
CDKL5-202ENST00000379996 CKAP4Q07065 602 aaKnown RBP8.4□□□□□ -1.07
CDKL5-202ENST00000379996 C2orf54Q08AI8 447 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 ZNF484Q5JVG2 852 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 ANO5Q75V66 913 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 CTU1Q7Z7A3 348 aaKnown RBP8.4□□□□□ -1.07
CDKL5-202ENST00000379996 TRIM58Q8NG06 486 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 ARMC5Q96C12 935 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 OSBPL9Q96SU4 736 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 KATNAL1Q9BW62 490 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 BCAS3Q9H6U6 928 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 RGL1Q9NZL6 768 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 AIPL1Q9NZN9 384 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 CEP72Q9P209 647 aa8.4□□□□□ -1.07
CDKL5-202ENST00000379996 ZBTB42B2RXF5 422 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 EPB41P11171 864 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 GAP43P17677 238 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 PRKCEQ02156 737 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 CTTNQ14247 550 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 BMT2Q1RMZ1 405 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 EMC10Q5UCC4 262 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 RINT1Q6NUQ1 792 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 LRRC31Q6UY01 552 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 BORCS6Q96GS4 357 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 SELENOOQ9BVL4 669 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 DHX33Q9H6R0 707 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 OLFML3Q9NRN5 406 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 NRBP2Q9NSY0 501 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 LCMT1Q9UIC8 334 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 NOP56O00567 594 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 ZEB2O60315 1214 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 HBP1O60381 514 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 DGAT1O75907 488 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 CABYRO75952 493 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 MOCS3O95396 460 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 RPLP2P05387 115 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 PLCB4Q15147 1175 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 BRDTQ58F21 947 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 SWSAP1Q6NVH7 229 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 FOXR1Q6PIV2 292 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 TPH2Q8IWU9 490 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 GSPT2Q8IYD1 628 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 PIK3R5Q8WYR1 880 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 JPH2Q9BR39 696 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 AZI2Q9H6S1 392 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 SIX2Q9NPC8 291 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 GDF3Q9NR23 364 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 CYP26B1Q9NR63 512 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 E9PMD0 336 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 CHMP2AO43633 222 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 MAFO75444 373 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 ECHS1P30084 290 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 MTIF2P46199 727 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 JAM2P57087 298 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 MCCD1P59942 119 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 PSMC6P62333 389 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 POU5F1BQ06416 359 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 GIT2Q14161 759 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 ZSCAN26Q16670 478 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 LHX8Q68G74 356 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 NFRKBQ6P4R8 1299 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 FBXO46Q6PJ61 603 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 EEPD1Q7L9B9 569 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 RNF10Q8N5U6 811 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 SPATA4Q8NEY3 305 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 COPS5Q92905 334 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 STRA6Q9BX79 667 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 IFIH1Q9BYX4 1025 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 AP5M1Q9H0R1 490 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 DMGDHQ9UI17 866 aaKnown RBP8.39□□□□□ -1.07
CDKL5-202ENST00000379996 PTCH2Q9Y6C5 1203 aa8.39□□□□□ -1.07
CDKL5-202ENST00000379996 DDX39AO00148 427 aaKnown RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 ATP9BO43861 1147 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 INHAP05111 366 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 RARBP10826 455 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 CASP5P51878 434 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 ADAM17P78536 824 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 PURAQ00577 322 aaKnown RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 GFPT1Q06210 699 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 ALCAMQ13740 583 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 RPAINQ86UA6 219 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 MCPH1Q8NEM0 835 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 AFG1LQ8WV93 481 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 HVCN1Q96D96 273 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 NTPCRQ9BSD7 190 aaKnown RBP8.38□□□□□ -1.07
CDKL5-202ENST00000379996 SYT11Q9BT88 431 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
CDKL5-202ENST00000379996 LRRC1Q9BTT6 524 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms