RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 NAA25Q14CX7 972 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 NCAPHQ15003 741 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 EMC2Q15006 297 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 LRRC41Q15345 812 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 TDRD10Q5VZ19 366 aaKnown RBP7□□□□□ -1.29
NEDD9-202ENST00000379446 RPAINQ86UA6 219 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 RABGGTAQ92696 567 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 CHMP6Q96FZ7 201 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 TNIP3Q96KP6 325 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 FAM20AQ96MK3 541 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 NT5C1BQ96P26 610 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 NOC4LQ9BVI4 516 aaKnown RBP7□□□□□ -1.29
NEDD9-202ENST00000379446 CCDC68Q9H2F9 335 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 ARMCX3Q9UH62 379 aaPredicted RBP7□□□□□ -1.29
NEDD9-202ENST00000379446 NAGPAQ9UK23 515 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 ODF2LQ9ULJ1 636 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 CTAGE9A4FU28 777 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 TEX33O43247 280 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 LGR5O75473 907 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 PCDH8O95206 1070 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 TGFB3P10600 412 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 NT5C2P49902 561 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 NPEPPSP55786 919 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 RPL10AP62906 217 aaKnown RBP7□□□□□ -1.29
NEDD9-202ENST00000379446 MTMR3Q13615 1198 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 E2F5Q15329 346 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 ARMC6Q6NXE6 501 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 XRRA1Q6P2D8 792 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 CASC4Q6P4E1 433 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 OTOP3Q7RTS5 596 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 HDXQ7Z353 690 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 MIB1Q86YT6 1006 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 TDHQ8IZJ6 230 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 VPS52Q8N1B4 723 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 CCNYQ8ND76 341 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 DDI1Q8WTU0 396 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 GPRASP2Q96D09 838 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 MCRS1Q96EZ8 462 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 MAML3Q96JK9 1138 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 PDCD2LQ9BRP1 358 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 EPB41L4AQ9HCS5 686 aaPredicted RBP7□□□□□ -1.29
NEDD9-202ENST00000379446 PDGFCQ9NRA1 345 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 MYO1AQ9UBC5 1043 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 RASAL2Q9UJF2 1139 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 CAPN7Q9Y6W3 813 aa7□□□□□ -1.29
NEDD9-202ENST00000379446 TOPAZ1Q8N9V7 1692 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 PER2O15055 1255 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 LGALS2P05162 132 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 BRD2P25440 801 aaKnown RBP6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CASP14P31944 242 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 RBL2Q08999 1139 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 TMEM132DQ14C87 1099 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 ARL13BQ3SXY8 428 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 SLC45A4Q5BKX6 768 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 SLC30A10Q6XR72 485 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 SRGAP1Q7Z6B7 1085 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 TRIM48Q8IWZ4 208 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 EHD4Q9H223 541 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 RGL1Q9NZL6 768 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 LTBP4Q8N2S1 1624 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 ITIH6Q6UXX5 1313 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 ADAMTSL3P82987 1691 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 NFAT5O94916 1531 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 POTEMA6NI47 508 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 PREPLQ4J6C6 727 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-202ENST00000379446 JAMLQ86YT9 394 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CHPFQ8IZ52 775 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 ACRBPQ8NEB7 543 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 GABPB2Q8TAK5 448 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-202ENST00000379446 SYTL5Q8TDW5 730 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-202ENST00000379446 IGDCC4Q8TDY8 1250 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 LARP4BQ92615 738 aaKnown RBP6.99□□□□□ -1.29
NEDD9-202ENST00000379446 TBC1D31Q96DN5 1066 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 MAGEB10Q96LZ2 347 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-202ENST00000379446 BPIFA3Q9BQP9 254 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 ZNF576Q9H609 170 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 NALCNQ8IZF0 1738 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CTAGE15A4D2H0 777 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CD4P01730 458 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 TUBB4AP04350 444 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CTAGE8P0CG41 777 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 SMIM10L2AP0DMW4 78 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 SMIM10L2BP0DMW5 78 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 ODC1P11926 461 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 DGKEP52429 567 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 MRPS25P82663 173 aaKnown RBP6.99□□□□□ -1.29
NEDD9-202ENST00000379446 PTK2Q05397 1052 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CDH18Q13634 790 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 AASDHQ4L235 1098 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-202ENST00000379446 MUM1L1Q5H9M0 696 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CTAGE6Q86UF2 777 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 PACS2Q86VP3 889 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CTAGE4Q8IX94 777 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 GPR20Q99678 358 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 EMILIN3Q9NT22 766 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 GGT7Q9UJ14 662 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 ZNF197O14709 1029 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 CA3P07451 260 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 HOXC6P09630 235 aa6.99□□□□□ -1.29
NEDD9-202ENST00000379446 PLA2G4BP0C869 781 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms