RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ARHGAP39Q9C0H5 1083 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 PTPRHQ9HD43 1115 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 RAB20Q9NX57 234 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 NENFQ9UMX5 172 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 MACROD2A1Z1Q3 448 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 VTNP04004 478 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 TNFSF9P41273 254 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 POU5F1BQ06416 359 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 MCL1Q07820 350 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 KAT2BQ92831 832 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 KREMEN1Q96MU8 473 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 FNBP1Q96RU3 617 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 PPP1R16BQ96T49 567 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 SYT11Q9BT88 431 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 SALL4Q9UJQ4 1053 aa18.78■□□□□ 0.6
THUMPD2-201ENST00000378727 A0A087WZ62 844 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 F2P00734 622 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 C4BPAP04003 597 aaKnown RBP18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 ANXA13P27216 316 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 IFNLR1Q8IU57 520 aaPredicted RBP18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 LRRN4CLQ8ND94 238 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 HELQQ8TDG4 1101 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 ELMO3Q96BJ8 720 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 FDXACB1Q9BRP7 624 aaPredicted RBP18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 TCHPQ9BT92 498 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 AKT3Q9Y243 479 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 MRFAP1Q9Y605 127 aa18.77■□□□□ 0.6
THUMPD2-201ENST00000378727 CTAGE9A4FU28 777 aa18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 DYNC1I1O14576 645 aa18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 SLU7O95391 586 aaKnown RBP18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 TNNI1P19237 187 aa18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 PHKA2P46019 1235 aa18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 PRPF4BQ13523 1007 aaKnown RBP18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 KIF22Q14807 665 aa18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 ZACNQ401N2 412 aa18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 SECISBP2LQ93073 1101 aaKnown RBP18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 NAPGQ99747 312 aaPredicted RBP18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 PACSIN1Q9BY11 444 aa18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 SETD4Q9NVD3 440 aa18.77■□□□□ 0.59
THUMPD2-201ENST00000378727 PCNTO95613 3336 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 DDX3XO00571 662 aaKnown RBP eCLIP18.76■□□□□ 0.594e-14■■■□□ 15.5
THUMPD2-201ENST00000378727 CSDE1O75534 798 aaKnown RBP18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 TMOD1P28289 359 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 HSP90AA2PQ14568 343 aaPredicted RBP18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 ATF7IP2Q5U623 682 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 TDRD10Q5VZ19 366 aaKnown RBP18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 EEF1DP3Q658K8 133 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 BRSK2Q8IWQ3 736 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 KIAA0319LQ8IZA0 1049 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 PPM1KQ8N3J5 372 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 SLC30A5Q8TAD4 765 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 LNX1Q8TBB1 728 aaPredicted RBP18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 PPP1R13LQ8WUF5 828 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 LMBR1Q8WVP7 490 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 CGRRF1Q99675 332 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 PI4K2AQ9BTU6 479 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 NAGPAQ9UK23 515 aa18.76■□□□□ 0.59
THUMPD2-201ENST00000378727 OGTO15294 1046 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 AMHR2Q16671 573 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 FAM187BQ17R55 369 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 KIAA0753Q2KHM9 967 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 MPZL3Q6UWV2 235 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 CDR2LQ86X02 465 aaPredicted RBP18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 TRPV1Q8NER1 839 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 TATDN2Q93075 761 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 VTI1AQ96AJ9 217 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 NT5C1BQ96P26 610 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 CAPN6Q9Y6Q1 641 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 MYH10P35580 1976 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 MOCS3O95396 460 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 VNN1O95497 513 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 SMIM10L2AP0DMW4 78 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 SMIM10L2BP0DMW5 78 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 PSMC4P43686 418 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 BMS1Q14692 1282 aaKnown RBP18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 NAA30Q147X3 362 aaPredicted RBP18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 NAB2Q15742 525 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 FMNL3Q8IVF7 1028 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 PRMT7Q9NVM4 692 aaPredicted RBP18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 CPSF3Q9UKF6 684 aaKnown RBP18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 GABRQQ9UN88 632 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 Q9Y3F1 56 aa18.75■□□□□ 0.59
THUMPD2-201ENST00000378727 AOC2O75106 756 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 FCGRTP55899 365 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 CHMP4BP1P59074 171 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 LACTBP83111 547 aaPredicted RBP18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 BEX3Q00994 111 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 ALKBH5Q6P6C2 394 aaKnown RBP18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 DNAAF5Q86Y56 855 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 TXLNBQ8N3L3 684 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 OR5B17Q8NGF7 314 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 SHC3Q92529 594 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 LUC7LQ9NQ29 371 aaKnown RBP18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 TNFSF13BQ9Y275 285 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 ANK1P16157 1881 aa18.74■□□□□ 0.59
THUMPD2-201ENST00000378727 RRN3P2A6NIE6 340 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 TBC1D8O95759 1140 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 HLA-DRAP01903 254 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 CCDC172P0C7W6 258 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 MFAP3P55082 362 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms