RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 PXMP2Q9NR77 195 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 DENND3A2RUS2 1198 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 PAEPP09466 180 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 CNGA1P29973 690 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 JAK3P52333 1124 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 EIF3BP55884 814 aaKnown RBP20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 CCDC125Q86Z20 511 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 WNK4Q96J92 1243 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 PABPC3Q9H361 631 aaKnown RBP20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 TMEM8AQ9HCN3 771 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 PNMA2Q9UL42 364 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 COQ4Q9Y3A0 265 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 RLFQ13129 1914 aa20.96■□□□□ 0.95
SHROOM1-202ENST00000378676 SPOPO43791 374 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 GPC3P51654 580 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 CDR2Q01850 454 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 SLC13A5Q86YT5 568 aaPredicted RBP20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 OTUD6BQ8N6M0 293 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 DDX1Q92499 740 aaKnown RBP20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 LPAR1Q92633 364 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 KIAA1683Q9H0B3 1180 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 ANKEF1Q9NU02 776 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 GTF3C4Q9UKN8 822 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 EXOC7Q9UPT5 735 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 ADGRA3Q8IWK6 1321 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 GGPS1O95749 300 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 GTF2A1P52655 376 aaPredicted RBP20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 FBXW10Q5XX13 1052 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 MDM1Q8TC05 714 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 TATDN2Q93075 761 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 TCEAL9Q9UHQ7 104 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 TELO2Q9Y4R8 837 aa20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 MYH9P35579 1960 aaKnown RBP20.95■□□□□ 0.94
SHROOM1-202ENST00000378676 RARAP10276 462 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 PDE6CP51160 858 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 LLGL1Q15334 1064 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 CYP1B1Q16678 543 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 MICALCLQ6ZW33 695 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 AGBL3Q8NEM8 1001 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 NT5C1BQ96P26 610 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 KMT5AQ9NQR1 393 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 DOCK1Q14185 1865 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 COILP38432 576 aaPredicted RBP20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 KCNJ1P48048 391 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 FNTAP49354 379 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 KRT76Q01546 638 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 DMP1Q13316 513 aaPredicted RBP20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 DENND2CQ68D51 928 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 C6orf89Q6UWU4 347 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 RNF207Q6ZRF8 634 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 FBXL13Q8NEE6 735 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 MORC4Q8TE76 937 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 TEPSINQ96N21 525 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 PI4K2AQ9BTU6 479 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 SEMA4AQ9H3S1 761 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 DDX20Q9UHI6 824 aaKnown RBP20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 ZNRF3Q9ULT6 936 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 PTPN22Q9Y2R2 807 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 CAPN7Q9Y6W3 813 aa20.94■□□□□ 0.94
SHROOM1-202ENST00000378676 ZNF862O60290 1169 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 GRIN3BO60391 1043 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 SFNP31947 248 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 CXCL9Q07325 125 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 CYP24A1Q07973 514 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 IFT88Q13099 833 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 SLC29A2Q14542 456 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 HOOK3Q86VS8 718 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 UHMK1Q8TAS1 419 aaKnown RBP20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 MFSD14AQ96MC6 490 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 RAB20Q9NX57 234 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 SMIM23A6NLE4 172 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 FGFR4P22455 802 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 SMTNP53814 917 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 MKRN4PQ13434 485 aaPredicted RBP20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 MTMR2Q13614 643 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 BYSLQ13895 437 aaKnown RBP20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 ARHGEF16Q5VV41 709 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 YTHDF3Q7Z739 585 aaKnown RBP20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 NIM1KQ8IY84 436 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 PSPC1Q8WXF1 523 aaKnown RBP20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 HVCN1Q96D96 273 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 FBXL18Q96ME1 805 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 AZI2Q9H6S1 392 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 RIPK3Q9Y572 518 aa20.93■□□□□ 0.94
SHROOM1-202ENST00000378676 EGFRP00533 1210 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 DLATP10515 647 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 RNF187Q5TA31 235 aaPredicted RBP20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 SV2AQ7L0J3 742 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 SLC17A8Q8NDX2 589 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 TMC2Q8TDI7 906 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 POMGNT1Q8WZA1 660 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 MOV10L1Q9BXT6 1211 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 RPAP3Q9H6T3 665 aaPredicted RBP20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 MYOZ2Q9NPC6 264 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 MAP3K20Q9NYL2 800 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 PHIPQ8WWQ0 1821 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 PODXLO00592 558 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 FSBPO95073 299 aa20.92■□□□□ 0.94
SHROOM1-202ENST00000378676 ACAD10Q6JQN1 1059 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms