RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 CEP19Q96LK0 163 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 FAM217BQ9NTX9 383 aaPredicted RBP15.36■□□□□ 0.05
PRDM16-203ENST00000378391 CPSF3Q9UKF6 684 aaKnown RBP15.36■□□□□ 0.05
PRDM16-203ENST00000378391 TRIM33Q9UPN9 1127 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 A0A1B0GW55 424 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 RHOBTB3O94955 611 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 DUX4L2P0CJ85 424 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 DUX4L3P0CJ86 424 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 DUX4L4P0CJ87 422 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 DUX4L5P0CJ88 424 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 DUX4L6P0CJ89 424 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 DUX4L7P0CJ90 424 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 TMTC4Q5T4D3 741 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 TRIM72Q6ZMU5 477 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 GIPC2Q8TF65 315 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 HPS3Q969F9 1004 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 LACRTQ9GZZ8 138 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 CPVLQ9H3G5 476 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 DUX4Q9UBX2 424 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 MINPP1Q9UNW1 487 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 TMA7Q9Y2S6 64 aaKnown RBP15.36■□□□□ 0.05
PRDM16-203ENST00000378391 TRIM17Q9Y577 477 aa15.36■□□□□ 0.05
PRDM16-203ENST00000378391 ARHGEF37A1IGU5 675 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 TRPC1P48995 793 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 EZH2Q15910 746 aaKnown RBP15.35■□□□□ 0.05
PRDM16-203ENST00000378391 SIX5Q8N196 739 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 TTC7AQ9ULT0 858 aaPredicted RBP15.35■□□□□ 0.05
PRDM16-203ENST00000378391 MAGED2Q9UNF1 606 aaPredicted RBP15.35■□□□□ 0.05
PRDM16-203ENST00000378391 PDXKO00764 312 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 USP11P51784 963 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 LRRC14Q15048 493 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 PPP6R3Q5H9R7 873 aaPredicted RBP15.35■□□□□ 0.05
PRDM16-203ENST00000378391 TMEM270Q6UE05 265 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 RHBDL2Q9NX52 303 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 IP6K2Q9UHH9 426 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 ARL2BPQ9Y2Y0 163 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 RPS6KA5O75582 802 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 RAD23BP54727 409 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 CDO1Q16878 200 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 CEP95Q96GE4 821 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 KRT82Q9NSB4 513 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 CLDN3O15551 220 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 CCDC22O60826 627 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 PDHA1P08559 390 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 PLEKP08567 350 aaPredicted RBP15.35■□□□□ 0.05
PRDM16-203ENST00000378391 ANO5Q75V66 913 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 UBE2Q1Q7Z7E8 422 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 SULF1Q8IWU6 871 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 ARL8AQ96BM9 186 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 NDE1Q9NXR1 346 aa15.35■□□□□ 0.05
PRDM16-203ENST00000378391 CARSP49589 748 aaKnown RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 GPS1Q13098 491 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 GIMAP8Q8ND71 665 aaPredicted RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 SUN2Q9UH99 717 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 DNAJC6O75061 913 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 SPOUT1Q5T280 376 aaKnown RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 HDDC2Q7Z4H3 204 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 SPATA21Q7Z572 469 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 PPM1NQ8N819 430 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 BTBD6Q96KE9 485 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 ATP6V0A4Q9HBG4 840 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 ASNSP08243 561 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 SRGAP2CP0DJJ0 459 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 KRT76Q01546 638 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 PDIA2Q13087 525 aaKnown RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 MTMR1Q13613 665 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 KIAA1755Q5JYT7 1200 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 POTEEQ6S8J3 1075 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 KCNV2Q8TDN2 545 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 DYDC2Q96IM9 177 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 TMEM260Q9NX78 707 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 KDM6AO15550 1401 aaPredicted RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 SLC12A1Q13621 1099 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 RCSD1Q6JBY9 416 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 MSL3Q8N5Y2 521 aaKnown RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 FAM161BQ96MY7 647 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 FMN2Q9NZ56 1722 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 TYW5A2RUC4 315 aaKnown RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 CAND2O75155 1236 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 GH2P01242 217 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 P4HBP07237 508 aaKnown RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 PAMP19021 973 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 SEC24CP53992 1094 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 COPS2P61201 443 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 ZNF394Q53GI3 561 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 IZUMO3Q5VZ72 239 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 SYDE1Q6ZW31 735 aaPredicted RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 TRMT10CQ7L0Y3 403 aaKnown RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 STAMBPL1Q96FJ0 436 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 OLFM3Q96PB7 478 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 BATF3Q9NR55 127 aa15.34■□□□□ 0.05
PRDM16-203ENST00000378391 DDX56Q9NY93 547 aaKnown RBP15.34■□□□□ 0.05
PRDM16-203ENST00000378391 LPXNO60711 386 aa15.33■□□□□ 0.05
PRDM16-203ENST00000378391 FBXL13Q8NEE6 735 aa15.33■□□□□ 0.05
PRDM16-203ENST00000378391 FAM167BQ9BTA0 163 aa15.33■□□□□ 0.05
PRDM16-203ENST00000378391 SMYD3Q9H7B4 428 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms