RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 HACE1Q8IYU2 909 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 ARNTL2Q8WYA1 636 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 EEF2KMTQ96G04 330 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 TMEM117Q9H0C3 514 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 RC3H2Q9HBD1 1191 aaKnown RBP12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 PLAGL2Q9UPG8 496 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 MRPL42Q9Y6G3 142 aaKnown RBP12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 A0A0B4J269 797 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 HOXA2O43364 376 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 PIGRP01833 764 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 MCF2P10911 925 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 SCP2P22307 547 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 KCNB1Q14721 858 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 NOMO2Q5JPE7 1267 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 ARMCX5Q6P1M9 558 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 LRRC55Q6ZSA7 311 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 APBB1IPQ7Z5R6 666 aaPredicted RBP12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 RABGGTAQ92696 567 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 HVCN1Q96D96 273 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 ACAP3Q96P50 834 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 CCDC94Q9BW85 323 aaPredicted RBP12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 NUP62CLQ9H1M0 184 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 ZNF576Q9H609 170 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 RMND1Q9NWS8 449 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 MIOSQ9NXC5 875 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 CACNG4Q9UBN1 327 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 AGO2Q9UKV8 859 aaKnown RBP12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 ZMYM2Q9UBW7 1377 aa12.8□□□□□ -0.36
DEPDC4-202ENST00000378244 NT5C1B-RDH14C9J2C7 533 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 TGFB1I1O43294 461 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 ZC3H11AO75152 810 aaKnown RBP eCLIP12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 CXCL8P10145 99 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 FXR1P51114 621 aaKnown RBP eCLIP12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 YARSP54577 528 aaKnown RBP12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 KNOP1Q1ED39 458 aaKnown RBP12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 ZNF280BQ86YH2 543 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 RDH13Q8NBN7 331 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 SPATA20Q8TB22 786 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 FAM213AQ9BRX8 229 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 CLSTN2Q9H4D0 955 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 TBC1D13Q9NVG8 400 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 MAN1B1Q9UKM7 699 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 COL6A3P12111 3177 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 TRANK1O15050 2925 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 RFXAPO00287 272 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 CYP2J2P51589 502 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 SLFN12LQ6IEE8 588 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 FAM43BQ6ZT52 329 aaPredicted RBP12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 HS2ST1Q7LGA3 356 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 GSTCDQ8NEC7 633 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 KCNN1Q92952 543 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 TTYH1Q9H313 450 aaPredicted RBP12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 DNAJB4Q9UDY4 337 aa12.79□□□□□ -0.36
DEPDC4-202ENST00000378244 OGTO15294 1046 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 B4GALT3O60512 393 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 BMP6P22004 513 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 GRM5P41594 1212 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 PRCPP42785 496 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 ZNF658Q5TYW1 1059 aaPredicted RBP12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 CMTR2Q8IYT2 770 aaKnown RBP12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 URGCPQ8TCY9 931 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 AGPAT3Q9NRZ7 376 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 GIT1Q9Y2X7 761 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 XIRP2A4UGR9 3374 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 MEFVO15553 781 aaPredicted RBP12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 DDHD2O94830 711 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 SLC10A6Q3KNW5 377 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 ELOA2Q8IYF1 753 aaPredicted RBP12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 UBN1Q9NPG3 1134 aa12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 TOPORSQ9NS56 1045 aaPredicted RBP12.78□□□□□ -0.36
DEPDC4-202ENST00000378244 PTGESO14684 152 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 FAM189A1O60320 539 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 CTNNB1P35222 781 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 GRIN2CQ14957 1233 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 ENOX2Q16206 610 aaKnown RBP12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 ZNF697Q5TEC3 545 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 TMEM130Q8N3G9 435 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 GBF1Q92538 1859 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 FAM193BQ96PV7 902 aaPredicted RBP12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 HSPBP1Q9NZL4 362 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 STYXL1Q9Y6J8 313 aa12.77□□□□□ -0.36
DEPDC4-202ENST00000378244 MBD3O95983 291 aa12.77□□□□□ -0.37
DEPDC4-202ENST00000378244 CLTAP09496 248 aa12.77□□□□□ -0.37
DEPDC4-202ENST00000378244 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
DEPDC4-202ENST00000378244 DEFB123Q8N688 67 aa12.77□□□□□ -0.37
DEPDC4-202ENST00000378244 FAM84AQ96KN4 292 aa12.77□□□□□ -0.37
DEPDC4-202ENST00000378244 ZMAT2Q96NC0 199 aaKnown RBP12.77□□□□□ -0.37
DEPDC4-202ENST00000378244 PAAF1Q9BRP4 392 aa12.77□□□□□ -0.37
DEPDC4-202ENST00000378244 MRPL9Q9BYD2 267 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms