RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 GJD3Q8N144 294 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 KRI1Q8N9T8 703 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 LRRC15Q8TF66 581 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 HASPINQ8TF76 798 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 CASP10Q92851 521 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 MSLNLQ96KJ4 702 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 ACO2Q99798 780 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 CCDC94Q9BW85 323 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 VN1R3Q9BXE9 311 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 EMILIN2Q9BXX0 1053 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 MRPL17Q9NRX2 175 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 BLOC1S4Q9NUP1 217 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 LARSQ9P2J5 1176 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 KCNG1Q9UIX4 513 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 TNFSF13BQ9Y275 285 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 SRPRBQ9Y5M8 271 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 HCFC2Q9Y5Z7 792 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 MUC3AQ02505 3323 aa12.7□□□□□ -0.38
SMARCE1-203ENST00000377808 INPPL1O15357 1258 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 TADA2AO75478 443 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 SOD2P04179 222 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 THP07101 528 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 KLRC2P26717 231 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 DSC1Q08554 894 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 COASYQ13057 564 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 SMAD2Q15796 467 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 RRAGBQ5VZM2 374 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 ANKRD54Q6NXT1 300 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 TAS1R3Q7RTX0 852 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 CEP120Q8N960 986 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 SMRP1Q8NCR6 262 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 TMEM161BQ8NDZ6 487 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 GSTCDQ8NEC7 633 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 SPIRE2Q8WWL2 714 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 HERC2P3Q9BVR0 1158 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 CDT1Q9H211 546 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 TFIP11Q9UBB9 837 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 ODF2LQ9ULJ1 636 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 USP15Q9Y4E8 981 aaPredicted RBP12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 ZMYM2Q9UBW7 1377 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 CUL9Q8IWT3 2517 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 MYH11P35749 1972 aa12.69□□□□□ -0.38
SMARCE1-203ENST00000377808 H0YCG3 227 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 PTGESO14684 152 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 EPCAMP16422 314 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 GLUD2P49448 558 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 TUSC3Q13454 348 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 SLC39A14Q15043 492 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 FUT10Q6P4F1 479 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 DYMQ7RTS9 669 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 TAS1R1Q7RTX1 841 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 ADHFE1Q8IWW8 467 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 B3GALT6Q96L58 329 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 POP1Q99575 1024 aaKnown RBP12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 PANK2Q9BZ23 570 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 CXCL16Q9H2A7 254 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 TOPORSQ9NS56 1045 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 ADAM28Q9UKQ2 775 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 SSX2IPQ9Y2D8 614 aa12.68□□□□□ -0.38
SMARCE1-203ENST00000377808 SPTLC2O15270 562 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 ZSCAN22P10073 491 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 MYBP10242 640 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 MAPTP10636 758 aaKnown RBP12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 MCF2P10911 925 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 SP100P23497 879 aaPredicted RBP12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 DDIT3P35638 169 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 GRM5P41594 1212 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 STAT6P42226 847 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 LIG4P49917 911 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 ZP2Q05996 745 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 NOLC1Q14978 699 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 TPRNQ4KMQ1 711 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 RARS2Q5T160 578 aaKnown RBP12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 CCDC73Q6ZRK6 1079 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 HAUS6Q7Z4H7 955 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 GLYCTKQ8IVS8 523 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 PDILTQ8N807 584 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 ACAP3Q96P50 834 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 KLHL5Q96PQ7 755 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 PAAF1Q9BRP4 392 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 CD320Q9NPF0 282 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 STK17AQ9UEE5 414 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 PRKAG3Q9UGI9 489 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 SF3B1O75533 1304 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 TTC28Q96AY4 2481 aa12.67□□□□□ -0.38
SMARCE1-203ENST00000377808 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-203ENST00000377808 HNRNPDLO14979 420 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms