RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 IL1RL1Q01638 556 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 C16orf86Q6ZW13 317 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 RAD54LQ92698 747 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 FAM213AQ9BRX8 229 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 HMGB1P1B2RPK0 211 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ATP2C1P98194 919 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ASPHQ12797 758 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 COASYQ13057 564 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 PPWD1Q96BP3 646 aaKnown RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 SDCCAG3Q96C92 435 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 USP27XA6NNY8 438 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 RGMBQ6NW40 437 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ARMC6Q6NXE6 501 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 TMEM199Q8N511 208 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ELAC2Q9BQ52 826 aaKnown RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 CENPKQ9BS16 269 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 AP1M1Q9BXS5 423 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ANGPTL2Q9UKU9 493 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 PLAAQ9Y263 795 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 SGK1O00141 431 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 NDUFA10O95299 355 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 KRT1P04264 644 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 GGCXP38435 758 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ESRRGP62508 458 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ZCCHC17Q9NP64 241 aaKnown RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ARHGAP23Q9P227 1491 aa11.48□□□□□ -0.57
HIF3A-205ENST00000377670 ADM5C9JUS6 153 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 H7C4K7 107 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 NR3C2P08235 984 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 HDLBPQ00341 1268 aaKnown RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ATG4CQ96DT6 458 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ZBTB22O15209 634 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 TTC4O95801 387 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 MSH2P43246 934 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 KCNB1Q14721 858 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 UNC13DQ70J99 1090 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 GSPT2Q8IYD1 628 aaKnown RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 CDC26Q8NHZ8 85 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 PANX2Q96RD6 677 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 CYTH2Q99418 400 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 SLC13A4Q9UKG4 626 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 PCDHA13Q9Y5I0 950 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 DCCP43146 1447 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 GPR75-ASB3A0A0A6YYF3 556 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 WDR91A4D1P6 747 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 TADA3O75528 432 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 KPNA1P52294 538 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 PRKCQQ04759 706 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 FMR1Q06787 632 aaKnown RBP eCLIP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 DARS2Q6PI48 645 aaKnown RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 LCA5Q86VQ0 697 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 APPL2Q8NEU8 664 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ADCY3O60266 1144 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ESRRBO95718 433 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 GCLMP48507 274 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ZC3H18Q86VM9 953 aaKnown RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 NUDCD1Q96RS6 583 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 BAG5Q9UL15 447 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 CNTNAP5Q8WYK1 1306 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 H0Y3Z8 333 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 RASGRF2O14827 1237 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 DNAJC8O75937 253 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ECEL1O95672 775 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 PDHA1P08559 390 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ST13P4Q8IZP2 240 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 CCHCR1Q8TD31 782 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 ACER1Q8TDN7 264 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 THOC1Q96FV9 657 aaKnown RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 SPATA17Q96L03 361 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 LXNQ9BS40 222 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 STN1Q9H668 368 aaKnown RBP11.47□□□□□ -0.57
HIF3A-205ENST00000377670 YY1AP1Q9H869 796 aa11.47□□□□□ -0.57
HIF3A-205ENST00000377670 DYNLT1P63172 113 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 PDE1BQ01064 536 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 TROAPQ12815 778 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 CES5AQ6NT32 575 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 CEP70Q8NHQ1 597 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 KCNV2Q8TDN2 545 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 EPC1Q9H2F5 836 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 LOC102724159A0A0B4J2E5 919 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 SRGAP2O75044 1071 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 INPP1P49441 399 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 BTG3Q14201 252 aaPredicted RBP11.46□□□□□ -0.57
HIF3A-205ENST00000377670 PWP2Q15269 919 aaKnown RBP11.46□□□□□ -0.57
HIF3A-205ENST00000377670 SGO2Q562F6 1265 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 EIF2AK1Q9BQI3 630 aaKnown RBP11.46□□□□□ -0.57
HIF3A-205ENST00000377670 HAUS8Q9BT25 410 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 TRPV6Q9H1D0 765 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 THAP9Q9H5L6 903 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 XPNPEP3Q9NQH7 507 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 PRR12Q9ULL5 1215 aa11.46□□□□□ -0.57
HIF3A-205ENST00000377670 XKR3Q5GH77 459 aa11.46□□□□□ -0.58
HIF3A-205ENST00000377670 CDCA5Q96FF9 252 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms