RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 EEF1DP3Q658K8 133 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 KIAA1841Q6NSI8 718 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.23■■□□□ 1.47
SRM-201ENST00000376957 EMILIN2Q9BXX0 1053 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 ZBP1Q9H171 429 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 MRPL17Q9NRX2 175 aaKnown RBP24.23■■□□□ 1.47
SRM-201ENST00000376957 USP20Q9Y2K6 914 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 PRG3Q9Y2Y8 225 aaPredicted RBP24.23■■□□□ 1.47
SRM-201ENST00000376957 IRAK3Q9Y616 596 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 MYH15Q9Y2K3 1946 aa24.23■■□□□ 1.47
SRM-201ENST00000376957 C2orf71A6NGG8 1288 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 TNFRSF10AO00220 468 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 URODP06132 367 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 GRM5P41594 1212 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 ZNF131P52739 623 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 KYAT1Q16773 422 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 USP49Q70CQ1 688 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 ZBTB33Q86T24 672 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 PPFIBP1Q86W92 1011 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 MIOSQ9NXC5 875 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 PCDHGC5Q9Y5F6 944 aa24.22■■□□□ 1.47
SRM-201ENST00000376957 GRXCR2A6NFK2 248 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 HIDE1A8MVS5 230 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 TADA2AO75478 443 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 LTBRP36941 435 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 ME1P48163 572 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 LIG4P49917 911 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 AMPD3Q01432 767 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 FOXD4L6Q3SYB3 417 aaPredicted RBP24.21■■□□□ 1.47
SRM-201ENST00000376957 FOXD4L3Q6VB84 417 aaPredicted RBP24.21■■□□□ 1.47
SRM-201ENST00000376957 TMEM173Q86WV6 379 aaPredicted RBP24.21■■□□□ 1.47
SRM-201ENST00000376957 GSTCDQ8NEC7 633 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 CASP10Q92851 521 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 ACAP3Q96P50 834 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 CUEDC2Q9H467 287 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 SLC38A7Q9NVC3 462 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 ANKFY1Q9P2R3 1169 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 SEL1LQ9UBV2 794 aa24.21■■□□□ 1.47
SRM-201ENST00000376957 HNRNPDLO14979 420 aaKnown RBP24.2■■□□□ 1.46
SRM-201ENST00000376957 LINC01565O15544 149 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 SOD2P04179 222 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 COASYQ13057 564 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 SMAD4Q13485 552 aaKnown RBP24.2■■□□□ 1.46
SRM-201ENST00000376957 NOLC1Q14978 699 aaKnown RBP eCLIP24.2■■□□□ 1.46
SRM-201ENST00000376957 ELMSAN1Q6PJG2 1045 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 DDX12PQ92771 950 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 KCNN1Q92952 543 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 PYM1Q9BRP8 204 aaKnown RBP24.2■■□□□ 1.46
SRM-201ENST00000376957 PANK2Q9BZ23 570 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 CDT1Q9H211 546 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 PTPRHQ9HD43 1115 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 FAM13BQ9NYF5 915 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 TBX20Q9UMR3 447 aa24.2■■□□□ 1.46
SRM-201ENST00000376957 REV3LO60673 3130 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 TBX10O75333 385 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 BRD1O95696 1058 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 EDN1P05305 212 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 HOXB8P17481 243 aaPredicted RBP24.19■■□□□ 1.46
SRM-201ENST00000376957 GAP43P17677 238 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 HSP90AA2PQ14568 343 aaPredicted RBP24.19■■□□□ 1.46
SRM-201ENST00000376957 TPRNQ4KMQ1 711 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 TMEM184AQ6ZMB5 413 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 DYMQ7RTS9 669 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 TAS1R3Q7RTX0 852 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 PDILTQ8N807 584 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 IQUBQ8NA54 791 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 UROC1Q96N76 676 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 POP1Q99575 1024 aaKnown RBP24.19■■□□□ 1.46
SRM-201ENST00000376957 PRKAG3Q9UGI9 489 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 DPP7Q9UHL4 492 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 ADAM28Q9UKQ2 775 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 A0A0C4DFX4 3053 aa24.19■■□□□ 1.46
SRM-201ENST00000376957 TCF20Q9UGU0 1960 aaKnown RBP24.19■■□□□ 1.46
SRM-201ENST00000376957 SF3B1O75533 1304 aaKnown RBP eCLIP24.18■■□□□ 1.467e-7■■■■■ 138.8
SRM-201ENST00000376957 B4GALT3O60512 393 aa24.18■■□□□ 1.46
SRM-201ENST00000376957 HARSP12081 509 aaKnown RBP24.18■■□□□ 1.46
SRM-201ENST00000376957 PROZP22891 400 aa24.18■■□□□ 1.46
SRM-201ENST00000376957 OSTNP61366 133 aa24.18■■□□□ 1.46
SRM-201ENST00000376957 CREMQ03060 361 aa24.18■■□□□ 1.46
SRM-201ENST00000376957 ELAVL2Q12926 359 aaKnown RBP24.18■■□□□ 1.46
SRM-201ENST00000376957 CLUL1Q15846 466 aa24.18■■□□□ 1.46
SRM-201ENST00000376957 BARX2Q9UMQ3 279 aaPredicted RBP24.18■■□□□ 1.46
SRM-201ENST00000376957 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.18■■□□□ 1.46
SRM-201ENST00000376957 SPDYE4A6NLX3 237 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 IDEP14735 1019 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 KLRC2P26717 231 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 GLUD2P49448 558 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 DLX2Q07687 328 aaPredicted RBP24.17■■□□□ 1.46
SRM-201ENST00000376957 USP41Q3LFD5 358 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 LLGL2Q6P1M3 1020 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 BCL7CQ8WUZ0 217 aaPredicted RBP24.17■■□□□ 1.46
SRM-201ENST00000376957 HVCN1Q96D96 273 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 HERC2P3Q9BVR0 1158 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 MRPL44Q9H9J2 332 aaKnown RBP24.17■■□□□ 1.46
SRM-201ENST00000376957 EXOC7Q9UPT5 735 aa24.17■■□□□ 1.46
SRM-201ENST00000376957 BRWD1Q9NSI6 2320 aa24.16■■□□□ 1.46
SRM-201ENST00000376957 CASTOR2A6NHX0 329 aa24.16■■□□□ 1.46
SRM-201ENST00000376957 PTGESO14684 152 aa24.16■■□□□ 1.46
SRM-201ENST00000376957 MBTPS2O43462 519 aa24.16■■□□□ 1.46
SRM-201ENST00000376957 CLASP2O75122 1294 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms