RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 RARAP10276 462 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 CHN1P15882 459 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 DPEP1P16444 411 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 KCNA3P22001 575 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 UBAP2Q5T6F2 1119 aaKnown RBP27.15■■□□□ 1.94
C9orf40-201ENST00000376854 CPXCR1Q8N123 301 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 RUNDC3BQ96NL0 473 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 CAMKK2Q96RR4 588 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 ZNF341Q9BYN7 854 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 TAOK3Q9H2K8 898 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 EXOC7Q9UPT5 735 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 FGFR4P22455 802 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 MMP13P45452 471 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 C4orf19Q8IY42 314 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 POP1Q99575 1024 aaKnown RBP27.15■■□□□ 1.94
C9orf40-201ENST00000376854 OSBPL7Q9BZF2 842 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 UVRAGQ9P2Y5 699 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 TBX20Q9UMR3 447 aa27.15■■□□□ 1.94
C9orf40-201ENST00000376854 PDE6CP51160 858 aa27.14■■□□□ 1.94
C9orf40-201ENST00000376854 RWDD2BP57060 319 aa27.14■■□□□ 1.94
C9orf40-201ENST00000376854 CDR2Q01850 454 aa27.14■■□□□ 1.94
C9orf40-201ENST00000376854 ADCY2Q08462 1091 aa27.14■■□□□ 1.94
C9orf40-201ENST00000376854 SIX1Q15475 284 aaPredicted RBP27.14■■□□□ 1.94
C9orf40-201ENST00000376854 C6orf118Q5T5N4 469 aa27.14■■□□□ 1.94
C9orf40-201ENST00000376854 PLA2G4FQ68DD2 849 aa27.14■■□□□ 1.94
C9orf40-201ENST00000376854 UHMK1Q8TAS1 419 aaKnown RBP27.14■■□□□ 1.94
C9orf40-201ENST00000376854 HELQQ8TDG4 1101 aa27.14■■□□□ 1.94
C9orf40-201ENST00000376854 ACTR5Q9H9F9 607 aaPredicted RBP27.14■■□□□ 1.94
C9orf40-201ENST00000376854 HOMER2Q9NSB8 354 aa27.14■■□□□ 1.94
C9orf40-201ENST00000376854 EIF2AK2P19525 551 aaKnown RBP27.13■■□□□ 1.93
C9orf40-201ENST00000376854 KCNJ1P48048 391 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 IFI35P80217 286 aaPredicted RBP27.13■■□□□ 1.93
C9orf40-201ENST00000376854 SLMAPQ14BN4 828 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 XKR9Q5GH70 373 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 NSMFQ6X4W1 530 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 SLC17A8Q8NDX2 589 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 SYTL5Q8TDW5 730 aaPredicted RBP27.13■■□□□ 1.93
C9orf40-201ENST00000376854 PARD3BQ8TEW8 1205 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 ART4Q93070 314 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 TMEM8AQ9HCN3 771 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 PASKQ96RG2 1323 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 MCCD1P59942 119 aaPredicted RBP27.13■■□□□ 1.93
C9orf40-201ENST00000376854 PSMC5P62195 406 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 CROCCP2Q86T23 111 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 KIFC3Q9BVG8 833 aa27.13■■□□□ 1.93
C9orf40-201ENST00000376854 RIPK2O43353 540 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 AGTP01019 485 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 ASNSP08243 561 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 GPC3P51654 580 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 FKBP1CQ5VVH2 108 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 RNF207Q6ZRF8 634 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 CYFIP1Q7L576 1253 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 TMEM161BQ8NDZ6 487 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 NT5C1BQ96P26 610 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 ADAM7Q9H2U9 754 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 COQ4Q9Y3A0 265 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 WNT10BO00744 389 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 RARGP13631 454 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 CNGA1P29973 690 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 SMTNP53814 917 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 FAM83AQ86UY5 434 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 TCEAL9Q9UHQ7 104 aa27.12■■□□□ 1.93
C9orf40-201ENST00000376854 MNAT1P51948 309 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 GHRHRQ02643 423 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 MAP4K3Q8IVH8 894 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 C12orf50Q8NA57 414 aaPredicted RBP27.11■■□□□ 1.93
C9orf40-201ENST00000376854 EPS8L3Q8TE67 593 aaKnown RBP27.11■■□□□ 1.93
C9orf40-201ENST00000376854 KIFAP3Q92845 792 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 CCDC114Q96M63 670 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 TAAR1Q96RJ0 339 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 CEP89Q96ST8 783 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 TMEM109Q9BVC6 243 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 RAVER2Q9HCJ3 691 aaKnown RBP27.11■■□□□ 1.93
C9orf40-201ENST00000376854 TOPORSQ9NS56 1045 aaPredicted RBP27.11■■□□□ 1.93
C9orf40-201ENST00000376854 ZNRF3Q9ULT6 936 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 ECEL1O95672 775 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 NPTX2P47972 431 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 SPRED3Q2MJR0 410 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 ANKRD20A8PQ5CZ79 823 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 FBXL13Q8NEE6 735 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 TAS1R2Q8TE23 839 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 ATXN2LQ8WWM7 1075 aaKnown RBP27.11■■□□□ 1.93
C9orf40-201ENST00000376854 RAB20Q9NX57 234 aa27.11■■□□□ 1.93
C9orf40-201ENST00000376854 ATP9AO75110 1047 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 MYCLP12524 364 aaPredicted RBP27.1■■□□□ 1.93
C9orf40-201ENST00000376854 SLCO1A2P46721 670 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 CXCL9Q07325 125 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 DMP1Q13316 513 aaPredicted RBP27.1■■□□□ 1.93
C9orf40-201ENST00000376854 PPP1R7Q15435 360 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 ACAD10Q6JQN1 1059 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 DDX1Q92499 740 aaKnown RBP27.1■■□□□ 1.93
C9orf40-201ENST00000376854 DHX38Q92620 1227 aaKnown RBP27.1■■□□□ 1.93
C9orf40-201ENST00000376854 ELMO3Q96BJ8 720 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 ZNF317Q96PQ6 595 aaPredicted RBP27.1■■□□□ 1.93
C9orf40-201ENST00000376854 DNM1LO00429 736 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 CLDN3O15551 220 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 DLATP10515 647 aaKnown RBP27.1■■□□□ 1.93
C9orf40-201ENST00000376854 JAK3P52333 1124 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 PGM5Q15124 567 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 MTMR14Q8NCE2 650 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms