RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 FBXO18Q8NFZ0 1043 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 RIN2Q8WYP3 895 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-204ENST00000376643 SMG7Q92540 1137 aaKnown RBP16.28■□□□□ 0.2
HDAC6-204ENST00000376643 ATOH1Q92858 354 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-204ENST00000376643 GPRC5CQ9NQ84 441 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 FBXL21Q9UKT6 434 aa16.28■□□□□ 0.2
HDAC6-204ENST00000376643 ZFP37Q9Y6Q3 630 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-204ENST00000376643 ST18O60284 1047 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-204ENST00000376643 GUCY1B3Q02153 619 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 PDIA5Q14554 519 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 ZNF174Q15697 407 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 LIN9Q5TKA1 542 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 POTEGQ6S5H5 508 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 GSTCDQ8NEC7 633 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 RTP3Q9BQQ7 232 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 TTPALQ9BTX7 342 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 KCNK12Q9HB15 430 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 MIOSQ9NXC5 875 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 EPS15L1Q9UBC2 864 aa16.27■□□□□ 0.2
HDAC6-204ENST00000376643 KMT2EQ8IZD2 1858 aa16.27■□□□□ 0.19
HDAC6-204ENST00000376643 TGM5O43548 720 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 DTNBO60941 627 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 RFX1P22670 979 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 CCT6AP40227 531 aaKnown RBP16.26■□□□□ 0.19
HDAC6-204ENST00000376643 KANK3Q6NY19 840 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 RTL10Q7L3V2 364 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 TAS1R1Q7RTX1 841 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 KCTD17Q8N5Z5 321 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 UROC1Q96N76 676 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 GPR62Q9BZJ7 368 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 PRKD2Q9BZL6 878 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 TOPORSQ9NS56 1045 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-204ENST00000376643 KLK14Q9P0G3 267 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 LRWD1Q9UFC0 647 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 DENND4AQ7Z401 1863 aa16.26■□□□□ 0.19
HDAC6-204ENST00000376643 TDRD15B5MCY1 1934 aaKnown RBP16.25■□□□□ 0.19
HDAC6-204ENST00000376643 WNT7AO00755 349 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 TRAPPC3O43617 180 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 RECQL4O94761 1208 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 HNRNPA1P09651 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
HDAC6-204ENST00000376643 HOXA9P31269 272 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 YARSP54577 528 aaKnown RBP16.25■□□□□ 0.19
HDAC6-204ENST00000376643 KRT79Q5XKE5 535 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 CDR2LQ86X02 465 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-204ENST00000376643 PALB2Q86YC2 1186 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 PIK3R5Q8WYR1 880 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 DRC1Q96MC2 740 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 TIPINQ9BVW5 301 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 NT5C3AQ9H0P0 336 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 C17orf75Q9HAS0 396 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 WNT16Q9UBV4 365 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 TRIOO75962 3097 aa16.25■□□□□ 0.19
HDAC6-204ENST00000376643 XYLBO75191 536 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 ZMYND10O75800 440 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 PDGFBP01127 241 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-204ENST00000376643 LIG1P18858 919 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 ST3GAL1Q11201 340 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 DMP1Q13316 513 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-204ENST00000376643 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-204ENST00000376643 FLCNQ8NFG4 579 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 CCDC94Q9BW85 323 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-204ENST00000376643 CCDC113Q9H0I3 377 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 BHMT2Q9H2M3 363 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 SLC38A7Q9NVC3 462 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 SNTG2Q9NY99 539 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 DNM3Q9UQ16 869 aa16.24■□□□□ 0.19
HDAC6-204ENST00000376643 RBM19Q9Y4C8 960 aaKnown RBP16.24■□□□□ 0.19
HDAC6-204ENST00000376643 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-204ENST00000376643 CASTOR2A6NHX0 329 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 PROB1E7EW31 1015 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 TMEM189-UBE2V1I3L0A0 370 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 K7ERI5 159 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 GFRA3O60609 400 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 POU2F2P09086 479 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 AOC1P19801 751 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 U2AF2P26368 475 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDAC6-204ENST00000376643 PRPHP41219 470 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 PSMD5Q16401 504 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 ATF7IP2Q5U623 682 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 FAM171A1Q5VUB5 890 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 LILRA6Q6PI73 481 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 CEP57Q86XR8 500 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 TMEM105Q8N8V8 129 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 SNX29Q8TEQ0 813 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 DDX27Q96GQ7 796 aaKnown RBP16.23■□□□□ 0.19
HDAC6-204ENST00000376643 FBXW11Q9UKB1 542 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 KIAA1024Q9UPX6 916 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 TNFSF13BQ9Y275 285 aa16.23■□□□□ 0.19
HDAC6-204ENST00000376643 CACNA1HO95180 2353 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 A0A087WWV3 80 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 PTGESO14684 152 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 RFPL2O75678 378 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 KIF4AO95239 1232 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 SRFP11831 508 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 UVSSAQ2YD98 709 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 PPM1LQ5SGD2 360 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 DCLRE1AQ6PJP8 1040 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms