RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 GFRA3O60609 400 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 RFPL2O75678 378 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 SPATA31D3P0C874 917 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 MYBP10242 640 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 RPA1P27694 616 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 TUSC3Q13454 348 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 POTEGQ6S5H5 508 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 PADI6Q6TGC4 694 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 SPATA31D4Q6ZUB0 917 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 GLYCTKQ8IVS8 523 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 DEPTORQ8TB45 409 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 LLPHQ9BRT6 129 aaKnown RBP20.42■□□□□ 0.86
HDAC6-202ENST00000376610 FOXP1Q9H334 677 aaPredicted RBP20.42■□□□□ 0.86
HDAC6-202ENST00000376610 FZD8Q9H461 694 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 ZDHHC7Q9NXF8 308 aa20.42■□□□□ 0.86
HDAC6-202ENST00000376610 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
HDAC6-202ENST00000376610 TGM5O43548 720 aa20.41■□□□□ 0.86
HDAC6-202ENST00000376610 PRKCBP05771 671 aa20.41■□□□□ 0.86
HDAC6-202ENST00000376610 LIG1P18858 919 aa20.41■□□□□ 0.86
HDAC6-202ENST00000376610 ZNF174Q15697 407 aa20.41■□□□□ 0.86
HDAC6-202ENST00000376610 CCDC83Q8IWF9 413 aa20.41■□□□□ 0.86
HDAC6-202ENST00000376610 IFT74Q96LB3 600 aa20.41■□□□□ 0.86
HDAC6-202ENST00000376610 NOL7Q9UMY1 257 aaKnown RBP20.41■□□□□ 0.86
HDAC6-202ENST00000376610 THP07101 528 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 CYP11B2P19099 503 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 MUTP22033 750 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 RFX1P22670 979 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 NAMPTP43490 491 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 RBM25P49756 843 aaKnown RBP20.4■□□□□ 0.86
HDAC6-202ENST00000376610 TTC38Q5R3I4 469 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 USP34Q70CQ2 3546 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 APBB1IPQ7Z5R6 666 aaPredicted RBP20.4■□□□□ 0.86
HDAC6-202ENST00000376610 FAM184AQ8NB25 1140 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 RABGGTAQ92696 567 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 NT5C3AQ9H0P0 336 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 PDZD7Q9H5P4 517 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 SNTG2Q9NY99 539 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.4■□□□□ 0.86
HDAC6-202ENST00000376610 EPS15L1Q9UBC2 864 aa20.4■□□□□ 0.86
HDAC6-202ENST00000376610 PTPRZ1P23471 2315 aaPredicted RBP20.39■□□□□ 0.86
HDAC6-202ENST00000376610 CASTOR2A6NHX0 329 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 ACKR2O00590 384 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 HMGN5P82970 282 aaKnown RBP20.39■□□□□ 0.85
HDAC6-202ENST00000376610 ELAVL2Q12926 359 aaKnown RBP20.39■□□□□ 0.85
HDAC6-202ENST00000376610 DCAF4L1Q3SXM0 396 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 PDXDC1Q6P996 788 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 CEP57Q86XR8 500 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 SIX5Q8N196 739 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 NXPE3Q969Y0 559 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 RTP3Q9BQQ7 232 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 TTPALQ9BTX7 342 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 PRKD2Q9BZL6 878 aa20.39■□□□□ 0.85
HDAC6-202ENST00000376610 RIF1Q5UIP0 2472 aaKnown RBP20.39■□□□□ 0.85
HDAC6-202ENST00000376610 RECQL4O94761 1208 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 RPL17P18621 184 aaKnown RBP20.38■□□□□ 0.85
HDAC6-202ENST00000376610 AOC1P19801 751 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 CCT6AP40227 531 aaKnown RBP20.38■□□□□ 0.85
HDAC6-202ENST00000376610 TRAPPC10P48553 1259 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 EFNA5P52803 228 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 LIN9Q5TKA1 542 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 FAM171A1Q5VUB5 890 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 NOSTRINQ8IVI9 506 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 HASPINQ8TF76 798 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 BSNDQ8WZ55 320 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 KIFAP3Q92845 792 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 ZNF707Q96C28 371 aaPredicted RBP20.38■□□□□ 0.85
HDAC6-202ENST00000376610 ZSCAN31Q96LW9 406 aaPredicted RBP20.38■□□□□ 0.85
HDAC6-202ENST00000376610 RAB34Q9BZG1 259 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 LRWD1Q9UFC0 647 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 STK24Q9Y6E0 443 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 DOCK8Q8NF50 2099 aa20.38■□□□□ 0.85
HDAC6-202ENST00000376610 STK25O00506 426 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 N4BP1O75113 896 aaKnown RBP20.37■□□□□ 0.85
HDAC6-202ENST00000376610 ZMYND10O75800 440 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 PSMD5Q16401 504 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 RTP2Q5QGT7 225 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 CWF19L1Q69YN2 538 aaKnown RBP20.37■□□□□ 0.85
HDAC6-202ENST00000376610 LILRA6Q6PI73 481 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 PRSS55Q6UWB4 352 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-202ENST00000376610 GET4Q7L5D6 327 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-202ENST00000376610 FBXO18Q8NFZ0 1043 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 PIK3R5Q8WYR1 880 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 MYADMQ96S97 322 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 PAAF1Q9BRP4 392 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 CCDC113Q9H0I3 377 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 CACNG4Q9UBN1 327 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 WNT16Q9UBV4 365 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 GDAQ9Y2T3 454 aa20.37■□□□□ 0.85
HDAC6-202ENST00000376610 PTGESO14684 152 aa20.36■□□□□ 0.85
HDAC6-202ENST00000376610 KIF4AO95239 1232 aa20.36■□□□□ 0.85
HDAC6-202ENST00000376610 PAPLNO95428 1278 aa20.36■□□□□ 0.85
HDAC6-202ENST00000376610 CFHP08603 1231 aa20.36■□□□□ 0.85
HDAC6-202ENST00000376610 FXR2P51116 673 aaKnown RBP eCLIP20.36■□□□□ 0.85
HDAC6-202ENST00000376610 RSAD2Q8WXG1 361 aa20.36■□□□□ 0.85
HDAC6-202ENST00000376610 BHMT2Q9H2M3 363 aa20.36■□□□□ 0.85
HDAC6-202ENST00000376610 SH2B1Q9NRF2 756 aaPredicted RBP20.36■□□□□ 0.85
HDAC6-202ENST00000376610 MYO15AQ9UKN7 3530 aa20.35■□□□□ 0.85
HDAC6-202ENST00000376610 TTLL13PA6NNM8 815 aa20.35■□□□□ 0.85
HDAC6-202ENST00000376610 PROB1E7EW31 1015 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms