RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ZBTB33Q86T24 672 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 PPM1KQ8N3J5 372 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 LRRN4CLQ8ND94 238 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 SMC1BQ8NDV3 1235 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 KAT5Q92993 513 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 HHIPL1Q96JK4 782 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 FAM84AQ96KN4 292 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 CARD6Q9BX69 1037 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 MINDY3Q9H8M7 445 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 SALL4Q9UJQ4 1053 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 NENFQ9UMX5 172 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 CAPN6Q9Y6Q1 641 aa19.12■□□□□ 0.65
CTTN-203ENST00000376561 PTPRJQ12913 1337 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 CNTNAP2Q9UHC6 1331 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 KIF3CO14782 793 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 CA12O43570 354 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 C4BPAP04003 597 aaKnown RBP19.11■□□□□ 0.65
CTTN-203ENST00000376561 MCL1Q07820 350 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 NAA30Q147X3 362 aaPredicted RBP19.11■□□□□ 0.65
CTTN-203ENST00000376561 KIF22Q14807 665 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 KIAA0753Q2KHM9 967 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 ZACNQ401N2 412 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 ALKBH5Q6P6C2 394 aaKnown RBP19.11■□□□□ 0.65
CTTN-203ENST00000376561 TSHZ1Q6ZSZ6 1077 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 TLK2Q86UE8 772 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 TRIM58Q8NG06 486 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 OLIG1Q8TAK6 271 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 KREMEN1Q96MU8 473 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 NT5C1BQ96P26 610 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 SYT11Q9BT88 431 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 CDC23Q9UJX2 597 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 AKT3Q9Y243 479 aa19.11■□□□□ 0.65
CTTN-203ENST00000376561 TMEM88BA6NKF7 163 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 DDX3XO00571 662 aaKnown RBP eCLIP19.1■□□□□ 0.658e-15■■■■□ 23.2
CTTN-203ENST00000376561 MOCS3O95396 460 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 IGHA2P01877 340 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 PROZP22891 400 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 CTGFP29279 349 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 PHKA2P46019 1235 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 MFAP3P55082 362 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 GRM1Q13255 1194 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 PRPF4BQ13523 1007 aaKnown RBP19.1■□□□□ 0.65
CTTN-203ENST00000376561 TUBB2AQ13885 445 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 MARCH8Q5T0T0 291 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 HELQQ8TDG4 1101 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 LENG1Q96BZ8 264 aaPredicted RBP19.1■□□□□ 0.65
CTTN-203ENST00000376561 TUBB2BQ9BVA1 445 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 PACSIN1Q9BY11 444 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 MGAMO43451 1857 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 MYH10P35580 1976 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 ENC1O14682 589 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 OGTO15294 1046 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 B4GALT5O43286 388 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 TACC1O75410 805 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 TNFSF9P41273 254 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 AMPD2Q01433 879 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 ATF7IP2Q5U623 682 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 TDRD10Q5VZ19 366 aaKnown RBP19.1■□□□□ 0.65
CTTN-203ENST00000376561 MPZL3Q6UWV2 235 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 BRSK2Q8IWQ3 736 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 RNF10Q8N5U6 811 aaKnown RBP19.1■□□□□ 0.65
CTTN-203ENST00000376561 MNS1Q8NEH6 495 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 SLC30A5Q8TAD4 765 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 LNX1Q8TBB1 728 aaPredicted RBP19.1■□□□□ 0.65
CTTN-203ENST00000376561 CGRRF1Q99675 332 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 PTPRHQ9HD43 1115 aa19.1■□□□□ 0.65
CTTN-203ENST00000376561 A0A087WZ62 844 aa19.09■□□□□ 0.65
CTTN-203ENST00000376561 ZC3H11AO75152 810 aaKnown RBP eCLIP19.09■□□□□ 0.651e-8■■□□□ 14.5
CTTN-203ENST00000376561 VTNP04004 478 aa19.09■□□□□ 0.65
CTTN-203ENST00000376561 IQCF3P0C7M6 154 aa19.09■□□□□ 0.65
CTTN-203ENST00000376561 NCBP1Q09161 790 aaKnown RBP19.09■□□□□ 0.65
CTTN-203ENST00000376561 IFNLR1Q8IU57 520 aaPredicted RBP19.09■□□□□ 0.65
CTTN-203ENST00000376561 FDXACB1Q9BRP7 624 aaPredicted RBP19.09■□□□□ 0.65
CTTN-203ENST00000376561 PRMT7Q9NVM4 692 aaPredicted RBP19.09■□□□□ 0.65
CTTN-203ENST00000376561 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.09■□□□□ 0.655e-6■■□□□ 13.6
CTTN-203ENST00000376561 V9GYY5 206 aaPredicted RBP19.09■□□□□ 0.65
CTTN-203ENST00000376561 ANO9A1A5B4 782 aa19.09■□□□□ 0.65
CTTN-203ENST00000376561 F2P00734 622 aa19.09■□□□□ 0.65
CTTN-203ENST00000376561 ATP1A1P05023 1023 aaKnown RBP19.09■□□□□ 0.65
CTTN-203ENST00000376561 PAXIP1Q6ZW49 1069 aaPredicted RBP19.09■□□□□ 0.65
CTTN-203ENST00000376561 GLYCTKQ8IVS8 523 aa19.09■□□□□ 0.65
CTTN-203ENST00000376561 SHC3Q92529 594 aa19.09■□□□□ 0.65
CTTN-203ENST00000376561 PI4K2AQ9BTU6 479 aa19.09■□□□□ 0.65
CTTN-203ENST00000376561 FAM187BQ17R55 369 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 ZNF568Q3ZCX4 644 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 PAPD7Q5XG87 772 aaKnown RBP19.08■□□□□ 0.65
CTTN-203ENST00000376561 FAM71AQ8IYT1 594 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 TATDN2Q93075 761 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 ELMO3Q96BJ8 720 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 NOX5Q96PH1 765 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 ALS2CR12Q96Q35 445 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 PPP1R16BQ96T49 567 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 SETD4Q9NVD3 440 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 CPSF3Q9UKF6 684 aaKnown RBP19.08■□□□□ 0.65
CTTN-203ENST00000376561 TNFSF13BQ9Y275 285 aa19.08■□□□□ 0.65
CTTN-203ENST00000376561 ATP8B3O60423 1300 aa19.08■□□□□ 0.64
CTTN-203ENST00000376561 RRN3P2A6NIE6 340 aa19.08■□□□□ 0.64
CTTN-203ENST00000376561 BUB1O43683 1085 aa19.08■□□□□ 0.64
CTTN-203ENST00000376561 HLA-DRAP01903 254 aa19.08■□□□□ 0.64
CTTN-203ENST00000376561 IRX5P78411 483 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms