RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 MINPP1Q9UNW1 487 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 DIS3Q9Y2L1 958 aaKnown RBP14.49□□□□□ -0.09
COL4A1-201ENST00000375820 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
COL4A1-201ENST00000375820 TTC26A0AVF1 554 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 MYO1CO00159 1063 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 WBP4O75554 376 aaKnown RBP14.49□□□□□ -0.09
COL4A1-201ENST00000375820 CHGBP05060 677 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 QARSP47897 775 aaKnown RBP14.49□□□□□ -0.09
COL4A1-201ENST00000375820 CENPAP49450 140 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 PWP1Q13610 501 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 PGBD3Q8N328 593 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 SLC25A41Q8N5S1 370 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL4A1-201ENST00000375820 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 TCP11X1B4DZS4 312 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 DGKIO75912 1065 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 RANBP1P43487 201 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 LONRF1Q17RB8 773 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 SGO1Q5FBB7 561 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 RNF149Q8NC42 400 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 TJP2Q9UDY2 1190 aa14.49□□□□□ -0.09
COL4A1-201ENST00000375820 DBR1Q9UK59 544 aaKnown RBP14.49□□□□□ -0.09
COL4A1-201ENST00000375820 RPS6P62753 249 aaKnown RBP14.48□□□□□ -0.09
COL4A1-201ENST00000375820 IFNEQ86WN2 208 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 TMEM143Q96AN5 459 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 AGO2Q9UKV8 859 aaKnown RBP14.48□□□□□ -0.09
COL4A1-201ENST00000375820 SYTL3Q4VX76 610 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 PATL1Q86TB9 770 aaKnown RBP14.48□□□□□ -0.09
COL4A1-201ENST00000375820 TRIM51Q9BSJ1 452 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 KIF28PB7ZC32 967 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 KRT72Q14CN4 511 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 QRICH1Q2TAL8 776 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 KRT39Q6A163 491 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 YAF2Q8IY57 180 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 GPD1LQ8N335 351 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 PLEKHA5Q9HAU0 1116 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 RNF181Q9P0P0 153 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 PCYT1AP49585 367 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 TBL3Q12788 808 aaKnown RBP14.48□□□□□ -0.09
COL4A1-201ENST00000375820 PKN3Q6P5Z2 889 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 MFN1Q8IWA4 741 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 DHX40Q8IX18 779 aaKnown RBP14.48□□□□□ -0.09
COL4A1-201ENST00000375820 RPAP3Q9H6T3 665 aaPredicted RBP14.48□□□□□ -0.09
COL4A1-201ENST00000375820 PALMDQ9NP74 551 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 TRAF3IP3Q9Y228 551 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 MIF4GDA9UHW6 222 aaKnown RBP14.48□□□□□ -0.09
COL4A1-201ENST00000375820 GUCY1A2P33402 732 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 CARSP49589 748 aaKnown RBP14.48□□□□□ -0.09
COL4A1-201ENST00000375820 RCSD1Q6JBY9 416 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 METP08581 1390 aa14.48□□□□□ -0.09
COL4A1-201ENST00000375820 TPI1P60174 286 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 TMCO5AQ8N6Q1 288 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 OR9Q1Q8NGQ5 310 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 CYGBQ8WWM9 190 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 CHORDC1Q9UHD1 332 aaPredicted RBP14.47□□□□□ -0.09
COL4A1-201ENST00000375820 ARHGAP10A1A4S6 786 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 ENO3P13929 434 aaPredicted RBP14.47□□□□□ -0.09
COL4A1-201ENST00000375820 AKT1P31749 480 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 DEUP1Q05D60 604 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 EFHBQ8N7U6 833 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 DCUN1D1Q96GG9 259 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 FAM167AQ96KS9 214 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 PCDHGB4Q9UN71 923 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 ARHGEF9O43307 516 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 HMOX2P30519 316 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 ETFBP38117 255 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 TRIM60Q495X7 471 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 C6orf10Q5SRN2 563 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 GCOM2Q9BZD3 368 aaPredicted RBP14.47□□□□□ -0.09
COL4A1-201ENST00000375820 P4HBP07237 508 aaKnown RBP14.47□□□□□ -0.09
COL4A1-201ENST00000375820 PDAP1Q13442 181 aaKnown RBP14.47□□□□□ -0.09
COL4A1-201ENST00000375820 SPATA2LQ8IUW3 424 aaPredicted RBP14.47□□□□□ -0.09
COL4A1-201ENST00000375820 PARP9Q8IXQ6 854 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 APRTP07741 180 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 CDKL3Q8IVW4 592 aaPredicted RBP14.47□□□□□ -0.09
COL4A1-201ENST00000375820 RHOT1Q8IXI2 618 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 C4orf33Q8N1A6 199 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 SH2D3CQ8N5H7 860 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 SYTL2Q9HCH5 934 aa14.47□□□□□ -0.09
COL4A1-201ENST00000375820 PEG3Q9GZU2 1588 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 RARBP10826 455 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 P3H1Q32P28 736 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 CLEC10AQ8IUN9 316 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 GALNT4Q8N4A0 578 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 MTBPQ96DY7 904 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 TAF1DQ9H5J8 278 aaPredicted RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 ELP3Q9H9T3 547 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 CD209Q9NNX6 404 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 BFARQ9NZS9 450 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 TRIM10Q9UDY6 481 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 TCOF1Q13428 1488 aaKnown RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 TBXAS1P24557 533 aaPredicted RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 GIMAP8Q8ND71 665 aaPredicted RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 TBC1D22BQ9NU19 505 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 F5H6K3 240 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 KLRC3Q07444 240 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 KIAA2013Q8IYS2 634 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 TRIM54Q9BYV2 358 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 TRIM45Q9H8W5 580 aaPredicted RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 PARVAQ9NVD7 372 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms