RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 NT5C1BQ96P26 610 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 PSMB7Q99436 277 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 BTBD7Q9P203 1132 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 VPS18Q9P253 973 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 AMFRQ9UKV5 643 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 LCTP09848 1927 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 SYNGAP1Q96PV0 1343 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 IGKV6D-21A0A0A0MT36 114 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 LDHAP00338 332 aaKnown RBP8.84□□□□□ -0.99
UBR4-202ENST00000375224 TNFRSF8P28908 595 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 NAMPTP43490 491 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 LIG4P49917 911 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 CNTN2Q02246 1040 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 CYP24A1Q07973 514 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 MFSD4BQ5TF39 518 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 DPY19L2Q6NUT2 758 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 USP50Q70EL3 339 aaPredicted RBP8.84□□□□□ -0.99
UBR4-202ENST00000375224 FASTKD5Q7L8L6 764 aaKnown RBP8.84□□□□□ -0.99
UBR4-202ENST00000375224 SEPT11Q9NVA2 429 aaKnown RBP8.84□□□□□ -0.99
UBR4-202ENST00000375224 STIM2Q9P246 746 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 DOCK5Q9H7D0 1870 aa8.84□□□□□ -0.99
UBR4-202ENST00000375224 ANKRD33BA6NCL7 494 aa8.84□□□□□ -1
UBR4-202ENST00000375224 SPDYE5A6NIY4 337 aa8.84□□□□□ -1
UBR4-202ENST00000375224 ADM5C9JUS6 153 aa8.84□□□□□ -1
UBR4-202ENST00000375224 KCNK3O14649 394 aa8.84□□□□□ -1
UBR4-202ENST00000375224 EXTL3O43909 919 aa8.84□□□□□ -1
UBR4-202ENST00000375224 GZMAP12544 262 aa8.84□□□□□ -1
UBR4-202ENST00000375224 IBSPP21815 317 aaPredicted RBP8.84□□□□□ -1
UBR4-202ENST00000375224 OSBPP22059 807 aa8.84□□□□□ -1
UBR4-202ENST00000375224 MATR3P43243 847 aaKnown RBP eCLIP8.84□□□□□ -17e-8■■■■■ 30.8
UBR4-202ENST00000375224 LIG3P49916 1009 aa8.84□□□□□ -1
UBR4-202ENST00000375224 PPIL2Q13356 520 aa8.84□□□□□ -1
UBR4-202ENST00000375224 TCEAL1Q15170 157 aa8.84□□□□□ -1
UBR4-202ENST00000375224 DAAM2Q86T65 1068 aa8.84□□□□□ -1
UBR4-202ENST00000375224 IFT20Q8IY31 132 aa8.84□□□□□ -1
UBR4-202ENST00000375224 ACTRT1Q8TDG2 376 aa8.84□□□□□ -1
UBR4-202ENST00000375224 SAAL1Q96ER3 474 aa8.84□□□□□ -1
UBR4-202ENST00000375224 LRRC1Q9BTT6 524 aa8.84□□□□□ -1
UBR4-202ENST00000375224 PORCNQ9H237 461 aa8.84□□□□□ -1
UBR4-202ENST00000375224 DHX33Q9H6R0 707 aaKnown RBP8.84□□□□□ -1
UBR4-202ENST00000375224 ELP3Q9H9T3 547 aa8.84□□□□□ -1
UBR4-202ENST00000375224 AGTPBP1Q9UPW5 1226 aa8.84□□□□□ -1
UBR4-202ENST00000375224 PAPPA2Q9BXP8 1791 aa8.83□□□□□ -1
UBR4-202ENST00000375224 LRRIQ3A6PVS8 624 aaPredicted RBP8.83□□□□□ -1
UBR4-202ENST00000375224 LRRN2O75325 713 aa8.83□□□□□ -1
UBR4-202ENST00000375224 HADHBP55084 474 aaKnown RBP8.83□□□□□ -1
UBR4-202ENST00000375224 SP2Q02086 613 aa8.83□□□□□ -1
UBR4-202ENST00000375224 ARHGEF19Q8IW93 802 aa8.83□□□□□ -1
UBR4-202ENST00000375224 FAM71AQ8IYT1 594 aa8.83□□□□□ -1
UBR4-202ENST00000375224 USP38Q8NB14 1042 aa8.83□□□□□ -1
UBR4-202ENST00000375224 DEPTORQ8TB45 409 aa8.83□□□□□ -1
UBR4-202ENST00000375224 PLEKHO2Q8TD55 490 aa8.83□□□□□ -1
UBR4-202ENST00000375224 AFAP1L1Q8TED9 768 aa8.83□□□□□ -1
UBR4-202ENST00000375224 SEPT1Q8WYJ6 367 aa8.83□□□□□ -1
UBR4-202ENST00000375224 CCDC127Q96BQ5 260 aa8.83□□□□□ -1
UBR4-202ENST00000375224 KIFC3Q9BVG8 833 aa8.83□□□□□ -1
UBR4-202ENST00000375224 RAB20Q9NX57 234 aa8.83□□□□□ -1
UBR4-202ENST00000375224 KCNH4Q9UQ05 1017 aa8.83□□□□□ -1
UBR4-202ENST00000375224 OTOFQ9HC10 1997 aa8.83□□□□□ -1
UBR4-202ENST00000375224 TPD52L2O43399 206 aaKnown RBP8.83□□□□□ -1
UBR4-202ENST00000375224 RTN2O75298 545 aa8.83□□□□□ -1
UBR4-202ENST00000375224 PPFIA2O75334 1257 aa8.83□□□□□ -1
UBR4-202ENST00000375224 AP1G2O75843 785 aa8.83□□□□□ -1
UBR4-202ENST00000375224 ECM2O94769 699 aaPredicted RBP8.83□□□□□ -1
UBR4-202ENST00000375224 SNUPNO95149 360 aaKnown RBP8.83□□□□□ -1
UBR4-202ENST00000375224 PIGRP01833 764 aa8.83□□□□□ -1
UBR4-202ENST00000375224 UBA1P22314 1058 aaKnown RBP8.83□□□□□ -1
UBR4-202ENST00000375224 PEX19P40855 299 aa8.83□□□□□ -1
UBR4-202ENST00000375224 TTLL12Q14166 644 aaPredicted RBP8.83□□□□□ -1
UBR4-202ENST00000375224 C1QTNF12Q5T7M4 302 aa8.83□□□□□ -1
UBR4-202ENST00000375224 PPM1KQ8N3J5 372 aa8.83□□□□□ -1
UBR4-202ENST00000375224 SLC35G2Q8TBE7 412 aa8.83□□□□□ -1
UBR4-202ENST00000375224 OTUD5Q96G74 571 aa8.83□□□□□ -1
UBR4-202ENST00000375224 ASCC2Q9H1I8 757 aaPredicted RBP8.83□□□□□ -1
UBR4-202ENST00000375224 TMEM134Q9H6X4 195 aa8.83□□□□□ -1
UBR4-202ENST00000375224 RMI1Q9H9A7 625 aa8.83□□□□□ -1
UBR4-202ENST00000375224 RBM12Q9NTZ6 932 aaKnown RBP8.83□□□□□ -1
UBR4-202ENST00000375224 STYXL1Q9Y6J8 313 aa8.83□□□□□ -1
UBR4-202ENST00000375224 SOWAHBA6NEL2 793 aa8.82□□□□□ -1
UBR4-202ENST00000375224 CCDC188H7C350 402 aa8.82□□□□□ -1
UBR4-202ENST00000375224 K7ERI5 159 aa8.82□□□□□ -1
UBR4-202ENST00000375224 GAS2O43903 313 aaKnown RBP8.82□□□□□ -1
UBR4-202ENST00000375224 FARP2O94887 1054 aaPredicted RBP8.82□□□□□ -1
UBR4-202ENST00000375224 ARL2P36404 184 aa8.82□□□□□ -1
UBR4-202ENST00000375224 STAT5BP51692 787 aa8.82□□□□□ -1
UBR4-202ENST00000375224 EPHB4P54760 987 aa8.82□□□□□ -1
UBR4-202ENST00000375224 SLC39A4Q6P5W5 647 aa8.82□□□□□ -1
UBR4-202ENST00000375224 EMBQ6PCB8 327 aa8.82□□□□□ -1
UBR4-202ENST00000375224 METTL7BQ6UX53 244 aa8.82□□□□□ -1
UBR4-202ENST00000375224 ARMC9Q7Z3E5 817 aa8.82□□□□□ -1
UBR4-202ENST00000375224 MORC4Q8TE76 937 aa8.82□□□□□ -1
UBR4-202ENST00000375224 SHC3Q92529 594 aa8.82□□□□□ -1
UBR4-202ENST00000375224 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -1
UBR4-202ENST00000375224 FNBP1Q96RU3 617 aa8.82□□□□□ -1
UBR4-202ENST00000375224 PAGR1Q9BTK6 254 aa8.82□□□□□ -1
UBR4-202ENST00000375224 ISCUQ9H1K1 167 aa8.82□□□□□ -1
UBR4-202ENST00000375224 AZI2Q9H6S1 392 aa8.82□□□□□ -1
UBR4-202ENST00000375224 STXBP5LQ9Y2K9 1186 aa8.82□□□□□ -1
UBR4-202ENST00000375224 PGRMC1O00264 195 aaKnown RBP8.82□□□□□ -1
UBR4-202ENST00000375224 GPC5P78333 572 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms