RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 WWC2-AS2Q96NR7 200 aa5.7□□□□□ -1.5
USP48-202ENST00000374730 LRRC37BQ96QE4 947 aa5.7□□□□□ -1.5
USP48-202ENST00000374730 OR10A5Q9H207 317 aa5.7□□□□□ -1.5
USP48-202ENST00000374730 MAP3K2Q9Y2U5 619 aa5.7□□□□□ -1.5
USP48-202ENST00000374730 TESMINQ9Y4I5 508 aa5.7□□□□□ -1.5
USP48-202ENST00000374730 SPATA31A3Q5VYP0 1347 aa5.7□□□□□ -1.5
USP48-202ENST00000374730 ANKRD62A6NC57 917 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 GOLGA6L3A6NEY3 463 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 GRM8O00222 908 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 MUSKO15146 869 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 GLRX3O76003 335 aaKnown RBP5.69□□□□□ -1.5
USP48-202ENST00000374730 BAG4O95429 457 aaKnown RBP5.69□□□□□ -1.5
USP48-202ENST00000374730 ANXA1P04083 346 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 HSPA4P34932 840 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 IRF9Q00978 393 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 CUL4AQ13619 759 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 RNF151Q2KHN1 245 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 PROSER3Q2NL68 480 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 HS1BP3Q53T59 392 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 TSHZ3Q63HK5 1081 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 TCTN3Q6NUS6 607 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 ZNF585AQ6P3V2 769 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 GIMAP6Q6P9H5 292 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 ZNF790Q6PG37 636 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 CNTROBQ8N137 903 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 C2orf69Q8N8R5 385 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 IGSF22Q8N9C0 903 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 GIMAP8Q8ND71 665 aaPredicted RBP5.69□□□□□ -1.5
USP48-202ENST00000374730 WDR48Q8TAF3 677 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 GNRHR2Q96P88 292 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 BOCQ9BWV1 1114 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 TMPRSS5Q9H3S3 457 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 IL1RAPL2Q9NP60 686 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 UCKL1Q9NWZ5 548 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 OAZ3Q9UMX2 235 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 TMA7Q9Y2S6 64 aaKnown RBP5.69□□□□□ -1.5
USP48-202ENST00000374730 RAD50Q92878 1312 aa5.69□□□□□ -1.5
USP48-202ENST00000374730 TOGARAM1Q9Y4F4 1720 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 A0A0G2JNJ9 132 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 RASSF10A6NK89 507 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 ARHGAP6O43182 974 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 FOXS1O43638 330 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 ADCY8P40145 1251 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 MRE11P49959 708 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 MECP2P51608 486 aaKnown RBP5.68□□□□□ -1.5
USP48-202ENST00000374730 KCNQ1P51787 676 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 RRADP55042 308 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 ARHGAP44Q17R89 818 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 KLHL40Q2TBA0 621 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 CATSPEREQ5SY80 951 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 AGBL4Q5VU57 503 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 TRIM68Q6AZZ1 485 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 CC2D1AQ6P1N0 951 aaPredicted RBP5.68□□□□□ -1.5
USP48-202ENST00000374730 LRSAM1Q6UWE0 723 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 OTOP2Q7RTS6 562 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 DDX53Q86TM3 631 aaKnown RBP5.68□□□□□ -1.5
USP48-202ENST00000374730 UNC5CLQ8IV45 518 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 CLASRPQ8N2M8 674 aaKnown RBP5.68□□□□□ -1.5
USP48-202ENST00000374730 HIPK4Q8NE63 616 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 CALML6Q8TD86 181 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 SH3RF3Q8TEJ3 882 aaPredicted RBP5.68□□□□□ -1.5
USP48-202ENST00000374730 RILPL2Q969X0 211 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 GPATCH3Q96I76 525 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 C9orf78Q9NZ63 289 aaPredicted RBP5.68□□□□□ -1.5
USP48-202ENST00000374730 Q9UFV3 132 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 ZFR2Q9UPR6 939 aaKnown RBP5.68□□□□□ -1.5
USP48-202ENST00000374730 WNK3Q9BYP7 1800 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 KCPQ6ZWJ8 1503 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 TCHHQ07283 1943 aa5.68□□□□□ -1.5
USP48-202ENST00000374730 RFX7Q2KHR2 1363 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 SPEF2Q9C093 1822 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 PLCH1Q4KWH8 1693 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 COL5A2P05997 1499 aaPredicted RBP5.67□□□□□ -1.5
USP48-202ENST00000374730 PRAMEF22A3QJZ6 481 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 RAD17O75943 681 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 ASLP04424 464 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 IGKV5-2P06315 115 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 ZBTB48P10074 688 aaPredicted RBP5.67□□□□□ -1.5
USP48-202ENST00000374730 XRCC6P12956 609 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP48-202ENST00000374730 CR2P20023 1033 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 IGFALSP35858 605 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 FNTBP49356 437 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 NEK4P51957 841 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 ZXDAP98168 799 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 CD83Q01151 205 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 OS9Q13438 667 aaPredicted RBP5.67□□□□□ -1.5
USP48-202ENST00000374730 BMS1Q14692 1282 aaKnown RBP5.67□□□□□ -1.5
USP48-202ENST00000374730 GRAMD4Q6IC98 578 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 ZCCHC8Q6NZY4 707 aaKnown RBP5.67□□□□□ -1.5
USP48-202ENST00000374730 TAX1BP1Q86VP1 789 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 FAM43AQ8N2R8 423 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 MRFAP1L1Q96HT8 127 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 KAZALD1Q96I82 304 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 SUCLG2Q96I99 432 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 TMX3Q96JJ7 454 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 LSG1Q9H089 658 aaKnown RBP5.67□□□□□ -1.5
USP48-202ENST00000374730 ECHDC1Q9NTX5 307 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 NR2E1Q9Y466 385 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 SLC30A1Q9Y6M5 507 aa5.67□□□□□ -1.5
USP48-202ENST00000374730 ANKRD36CQ5JPF3 1778 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms