RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ABI1Q8IZP0 508 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 ADSSL1Q8N142 457 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 FIBCD1Q8N539 461 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 CEP120Q8N960 986 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 POMGNT1Q8WZA1 660 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 ACAP3Q96P50 834 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 CBWD1Q9BRT8 395 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 MRPL9Q9BYD2 267 aaKnown RBP12.4□□□□□ -0.42
HSPG2-202ENST00000374676 AGPAT3Q9NRZ7 376 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 KANSL3Q9P2N6 904 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 PARP2Q9UGN5 583 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 CPSF3Q9UKF6 684 aaKnown RBP12.4□□□□□ -0.42
HSPG2-202ENST00000374676 TRAF3IP3Q9Y228 551 aa12.4□□□□□ -0.42
HSPG2-202ENST00000374676 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 ARL5CA6NH57 179 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 BIN1O00499 593 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 CALUO43852 315 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 RECQL4O94761 1208 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 ADRB2P07550 413 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 MYOGP15173 224 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 GATMP50440 423 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 YARSP54577 528 aaKnown RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 STIM1Q13586 685 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 NFIL3Q16649 462 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 KLHL40Q2TBA0 621 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 SKOR2Q2VWA4 1001 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 CCDC183Q5T5S1 534 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 ISM2Q6H9L7 571 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 CENPPQ6IPU0 288 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 ARMCX5Q6P1M9 558 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 SLC9A9Q8IVB4 645 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 TMEM192Q8IY95 271 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 SMYD4Q8IYR2 804 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 GSTCDQ8NEC7 633 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 URGCPQ8TCY9 931 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 DHTKD1Q96HY7 919 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 FBXL18Q96ME1 805 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 GAD1Q99259 594 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 PLEKHA5Q9HAU0 1116 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 TOPORSQ9NS56 1045 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 DMAC2Q9NW81 257 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 MAPK8IP1Q9UQF2 711 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 YBX2Q9Y2T7 364 aaKnown RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 ANK1P16157 1881 aa12.39□□□□□ -0.43
HSPG2-202ENST00000374676 PDCD11Q14690 1871 aaKnown RBP12.39□□□□□ -0.43
HSPG2-202ENST00000374676 RALGAPA2Q2PPJ7 1873 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 TMEM265A0A087WTH1 108 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 TTC26A0AVF1 554 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 LCHNA4D1U4 455 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 LINC01553A4QN01 128 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 CLIC2O15247 247 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 EXTL3O43909 919 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 CA3P07451 260 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 DNAJB2P25686 324 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 MLH1P40692 756 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 AFF1P51825 1210 aaKnown RBP12.38□□□□□ -0.43
HSPG2-202ENST00000374676 OSTNP61366 133 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 SLC10A6Q3KNW5 377 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 FOXR2Q6PJQ5 311 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 CRELD2Q6UXH1 353 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-202ENST00000374676 LRRC55Q6ZSA7 311 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 CD302Q8IX05 232 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 LRRC43Q8N309 656 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 GPD1LQ8N335 351 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 XXYLT1Q8NBI6 393 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 CLP1Q92989 425 aaKnown RBP12.38□□□□□ -0.43
HSPG2-202ENST00000374676 SYAP1Q96A49 352 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-202ENST00000374676 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 NKX2-4Q9H2Z4 354 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 PCIF1Q9H4Z3 704 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 CWH43Q9H720 699 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 RPF1Q9H9Y2 349 aaKnown RBP12.38□□□□□ -0.43
HSPG2-202ENST00000374676 KIAA1586Q9HCI6 787 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 MIOSQ9NXC5 875 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 HSPBP1Q9NZL4 362 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 KLK14Q9P0G3 267 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 TMEM63CQ9P1W3 806 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 TRANK1O15050 2925 aa12.38□□□□□ -0.43
HSPG2-202ENST00000374676 KIAA1671Q9BY89 1806 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 CARNS1A5YM72 827 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-202ENST00000374676 PTGESO14684 152 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 PSMA7O14818 248 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-202ENST00000374676 THP07101 528 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 LINC00271P0C7V0 271 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 KCNE1P15382 129 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
HSPG2-202ENST00000374676 CCNE1P24864 410 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 TNFSF9P41273 254 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 ACOT2P49753 483 aa12.37□□□□□ -0.43
HSPG2-202ENST00000374676 SCNN1GP51170 649 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms