RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 TDRD10Q5VZ19 366 aaKnown RBP13.58□□□□□ -0.23
PRPF4-202ENST00000374199 PALB2Q86YC2 1186 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 BRSK2Q8IWQ3 736 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 SPATA33Q96N06 139 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 C2orf40Q9H1Z8 148 aa13.58□□□□□ -0.23
PRPF4-202ENST00000374199 UBE2TQ9NPD8 197 aaPredicted RBP13.58□□□□□ -0.23
PRPF4-202ENST00000374199 AGO2Q9UKV8 859 aaKnown RBP13.58□□□□□ -0.23
PRPF4-202ENST00000374199 ANKRD62A6NC57 917 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 GOLGA8IPA6NC78 632 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 GOLGA8JA6NMD2 632 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 ZNF185O15231 689 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 ASAP2O43150 1006 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 GPR142Q7Z601 462 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 RDH13Q8NBN7 331 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 RFFLQ8WZ73 363 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 MAML3Q96JK9 1138 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 CPSF3Q9UKF6 684 aaKnown RBP13.58□□□□□ -0.24
PRPF4-202ENST00000374199 TTLL13PA6NNM8 815 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 TOM1L1O75674 476 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 TBC1D8O95759 1140 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 GALCP54803 685 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 MFAP3P55082 362 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 FMO1Q01740 532 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 MBTD1Q05BQ5 628 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 STRN3Q13033 797 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 BEND6Q5SZJ8 279 aaPredicted RBP13.58□□□□□ -0.24
PRPF4-202ENST00000374199 C11orf63Q6NUN7 778 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 NOP9Q86U38 636 aaKnown RBP13.58□□□□□ -0.24
PRPF4-202ENST00000374199 ACTRT1Q8TDG2 376 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 PARK7Q99497 189 aaKnown RBP13.58□□□□□ -0.24
PRPF4-202ENST00000374199 POP1Q99575 1024 aaKnown RBP13.58□□□□□ -0.24
PRPF4-202ENST00000374199 AZI2Q9H6S1 392 aa13.58□□□□□ -0.24
PRPF4-202ENST00000374199 TOPORSQ9NS56 1045 aaPredicted RBP13.58□□□□□ -0.24
PRPF4-202ENST00000374199 SLC15A5A6NIM6 579 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 H2AFZP0C0S5 128 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 TXNP10599 105 aaKnown RBP13.57□□□□□ -0.24
PRPF4-202ENST00000374199 PTENP60484 403 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 IFI16Q16666 785 aaKnown RBP13.57□□□□□ -0.24
PRPF4-202ENST00000374199 NFRKBQ6P4R8 1299 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 H2AFVQ71UI9 128 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 NT5DC3Q86UY8 548 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 GLYCTKQ8IVS8 523 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 DHX37Q8IY37 1157 aaKnown RBP13.57□□□□□ -0.24
PRPF4-202ENST00000374199 CXorf38Q8TB03 319 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 KAT5Q92993 513 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 PCDHB18PQ96TA0 734 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 IFT122Q9HBG6 1241 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 ERAP1Q9NZ08 941 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 K7ERI5 159 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 CYP1A2P05177 515 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 MAPK4P31152 587 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 LIG4P49917 911 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 ZNF677Q86XU0 584 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 DEPTORQ8TB45 409 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 COPS5Q92905 334 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 FAM213AQ9BRX8 229 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
PRPF4-202ENST00000374199 PUF60Q9UHX1 559 aaKnown RBP13.57□□□□□ -0.24
PRPF4-202ENST00000374199 CLSTN1O94985 981 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 GH1P01241 217 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 LGALS2P05162 132 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 SP4Q02446 784 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 MAP2K1Q02750 393 aaPredicted RBP13.56□□□□□ -0.24
PRPF4-202ENST00000374199 GPR162Q16538 588 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 DUSP28Q4G0W2 176 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 WDR49Q8IV35 697 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 SLC20A1Q8WUM9 679 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 FUT8Q9BYC5 575 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.56□□□□□ -0.24
PRPF4-202ENST00000374199 TAS2R14Q9NYV8 317 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 ACKR2O00590 384 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 MEFVO15553 781 aaPredicted RBP13.56□□□□□ -0.24
PRPF4-202ENST00000374199 CDR2Q01850 454 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 ARID5AQ03989 594 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 ZBTB41Q5SVQ8 909 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 MARCH8Q5T0T0 291 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 ANKRD13CQ8N6S4 541 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 SPATA4Q8NEY3 305 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 MRPL4Q9BYD3 311 aaKnown RBP13.56□□□□□ -0.24
PRPF4-202ENST00000374199 EPC1Q9H2F5 836 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 COG5Q9UP83 839 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 SRCAPQ6ZRS2 3230 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 DDX3YO15523 660 aaKnown RBP13.56□□□□□ -0.24
PRPF4-202ENST00000374199 SORBS3O60504 671 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 RTN2O75298 545 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 UNGP13051 313 aaPredicted RBP13.56□□□□□ -0.24
PRPF4-202ENST00000374199 CYP11B1P15538 503 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 HOXC8P31273 242 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 GLE1Q53GS7 698 aaKnown RBP13.56□□□□□ -0.24
PRPF4-202ENST00000374199 CD101Q93033 1021 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 TNFSF13BQ9Y275 285 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 EVPLQ92817 2033 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 CASP8AP2Q9UKL3 1982 aa13.56□□□□□ -0.24
PRPF4-202ENST00000374199 BUB1O43683 1085 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 KIF4AO95239 1232 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 CYP1A1P04798 512 aaPredicted RBP13.55□□□□□ -0.24
PRPF4-202ENST00000374199 TEX35Q5T0J7 233 aa13.55□□□□□ -0.24
PRPF4-202ENST00000374199 RASAL3Q86YV0 1011 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms