RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TCEA3O75764 348 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 PABPC4LP0CB38 370 aaKnown RBP13.78□□□□□ -0.2
PRPF4-201ENST00000374198 PCP11498 1178 aaKnown RBP13.78□□□□□ -0.2
PRPF4-201ENST00000374198 CYP7A1P22680 504 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 EPM2AIP1Q7L775 607 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-201ENST00000374198 SPATA24Q86W54 205 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 CDK5RAP3Q96JB5 506 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 BTBD10Q9BSF8 475 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 YIPF2Q9BWQ6 316 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 SLCO1B3Q9NPD5 702 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 LRP2BPQ9P2M1 347 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
PRPF4-201ENST00000374198 TBK1Q9UHD2 729 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 LGALS13Q9UHV8 139 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 CHMP2BQ9UQN3 213 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 ACTL7BQ9Y614 415 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 SYNGAP1Q96PV0 1343 aa13.78□□□□□ -0.2
PRPF4-201ENST00000374198 FAM47DPA6NHR8 397 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 TMEM253P0C7T8 217 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 CALCOCO2Q13137 446 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 MPP3Q13368 585 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 CTC1Q2NKJ3 1217 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 ADGRA1Q86SQ6 560 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 SH3RF3Q8TEJ3 882 aaPredicted RBP13.77□□□□□ -0.2
PRPF4-201ENST00000374198 RAD54LQ92698 747 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 ATAD5Q96QE3 1844 aa13.77□□□□□ -0.2
PRPF4-201ENST00000374198 A6NJR5 290 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 EXOC3O60645 756 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.21
PRPF4-201ENST00000374198 ASMTLO95671 621 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 TTC4O95801 387 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 VAV1P15498 845 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 PON1P27169 355 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 COASYQ13057 564 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 RGS9BPQ6ZS82 235 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 CCDC105Q8IYK2 499 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.21
PRPF4-201ENST00000374198 ANKRD35Q8N283 1001 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 NLGN1Q8N2Q7 840 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 NME8Q8N427 588 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 DYDC2Q96IM9 177 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 IQCGQ9H095 443 aaKnown RBP13.77□□□□□ -0.21
PRPF4-201ENST00000374198 NAALADL1Q9UQQ1 740 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 DLEC1Q9Y238 1755 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 IGSF9BQ9UPX0 1349 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 MAGEB6P1A0A0J9YX57 407 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 CETPP11597 493 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 CTTNQ14247 550 aaKnown RBP13.77□□□□□ -0.21
PRPF4-201ENST00000374198 CLNKQ7Z7G1 428 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 SLC30A5Q8TAD4 765 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 LNX1Q8TBB1 728 aaPredicted RBP13.77□□□□□ -0.21
PRPF4-201ENST00000374198 WDR60Q8WVS4 1066 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 SYT17Q9BSW7 474 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 HDAC9Q9UKV0 1011 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 WASF2Q9Y6W5 498 aa13.77□□□□□ -0.21
PRPF4-201ENST00000374198 MMP10P09238 476 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 GYS1P13807 737 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 SLC5A1P13866 664 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 MUTP22033 750 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 COILP38432 576 aaPredicted RBP13.76□□□□□ -0.21
PRPF4-201ENST00000374198 TXKP42681 527 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 CTSWP56202 376 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 JAM2P57087 298 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 TTLL12Q14166 644 aaPredicted RBP13.76□□□□□ -0.21
PRPF4-201ENST00000374198 FAM26FQ5R3K3 315 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 PHLDB3Q6NSJ2 640 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 NLRP9Q7RTR0 991 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 HEATR3Q7Z4Q2 680 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 MTDHQ86UE4 582 aaKnown RBP13.76□□□□□ -0.21
PRPF4-201ENST00000374198 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
PRPF4-201ENST00000374198 RIBC1Q8N443 379 aaPredicted RBP13.76□□□□□ -0.21
PRPF4-201ENST00000374198 PPP1R14BQ96C90 147 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.76□□□□□ -0.21
PRPF4-201ENST00000374198 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 C2CD2LO14523 706 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 ZWINTO95229 277 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 ABCB4P21439 1286 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 HPCAP84074 193 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 DSG1Q02413 1049 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 KYNUQ16719 465 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 FAM47AQ5JRC9 791 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 WDR66Q8TBY9 1149 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 RMI1Q9H9A7 625 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 AJAP1Q9UKB5 411 aaPredicted RBP13.76□□□□□ -0.21
PRPF4-201ENST00000374198 MYH3P11055 1940 aa13.76□□□□□ -0.21
PRPF4-201ENST00000374198 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.75□□□□□ -0.21
PRPF4-201ENST00000374198 A0A0J9YVX5 310 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 TP73O15350 636 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 GYG2O15488 501 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 CDH16O75309 829 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 GFPT2O94808 682 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 GGPS1O95749 300 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 CHKAP35790 457 aa13.75□□□□□ -0.21
PRPF4-201ENST00000374198 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms