RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GALCP54803 685 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 CDR2Q01850 454 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 ARID5AQ03989 594 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 PPFIA1Q13136 1202 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 MTMR3Q13615 1198 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 LAMC2Q13753 1193 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 DHX34Q14147 1143 aaKnown RBP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 TTLL4Q14679 1199 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 TERF2Q15554 542 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 ZNF484Q5JVG2 852 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 PHLDB3Q6NSJ2 640 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 C15orf39Q6ZRI6 1047 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 CEP128Q6ZU80 1094 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 DAAM2Q86T65 1068 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 NT5DC4Q86YG4 428 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 CCDC60Q8IWA6 550 aaPredicted RBP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 SCFD2Q8WU76 684 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 LRRC45Q96CN5 670 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 BICD1Q96G01 975 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 CBWD1Q9BRT8 395 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 MRPL4Q9BYD3 311 aaKnown RBP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 DNAI2Q9GZS0 605 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 RAB17Q9H0T7 212 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 MLXIPQ9HAP2 919 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 MRPL47Q9HD33 250 aaKnown RBP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 ZCCHC17Q9NP64 241 aaKnown RBP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 SLC5A4Q9NY91 659 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 GTF3C4Q9UKN8 822 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 AGO2Q9UKV8 859 aaKnown RBP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 CNTN6Q9UQ52 1028 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 A0A0B4J269 797 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 IGKV6-21A0A0C4DH24 114 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 A0A0U1RQJ8 604 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 FOXN3O00409 490 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 PODXLO00592 558 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 ARHGAP33O14559 1287 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 HBP1O60381 514 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 TOM1L1O75674 476 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 RHOXF2BP0C7M4 288 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 ADSSP30520 456 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 CETN2P41208 172 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 PLA2G4AP47712 749 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 VSNL1P62760 191 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 CBX1P83916 185 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 TNFAIP2Q03169 654 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 TAP1Q03518 808 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 PPP3CAQ08209 521 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 PTP4A2Q12974 167 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 PRPF4BQ13523 1007 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 UGCGQ16739 394 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 ZACNQ401N2 412 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 CELF3Q5SZQ8 465 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 CFAP58Q5T655 872 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 LDLRAD1Q5T700 205 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 CDCA2Q69YH5 1023 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 SYDE1Q6ZW31 735 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 NT5DC3Q86UY8 548 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 WDR49Q8IV35 697 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 CD302Q8IX05 232 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 NOA1Q8NC60 698 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 SLC35G2Q8TBE7 412 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 ATP8B4Q8TF62 1192 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 U2AF1L4Q8WU68 220 aaKnown RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 ATRIPQ8WXE1 791 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 RHOXF2Q9BQY4 288 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 GPR88Q9GZN0 384 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 POLR3FQ9H1D9 316 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 ASCC2Q9H1I8 757 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 GDF3Q9NR23 364 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 FAM114A2Q9NRY5 505 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 HDAC6Q9UBN7 1215 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 RASAL2Q9UJF2 1139 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 MTUS1Q9ULD2 1270 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 STXBP5LQ9Y2K9 1186 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 SCINQ9Y6U3 715 aa9.38□□□□□ -0.91
SNRNP40-202ENST00000373720 RBM47A0AV96 593 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 LRRIQ3A6PVS8 624 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 GOLGA8KD6RF30 607 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 NOP56O00567 594 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 KCNK3O14649 394 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 CLDN3O15551 220 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 SART1O43290 800 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 THAP12O43422 761 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 BUB1O43683 1085 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 IL18RAPO95256 599 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 CYP1A2P05177 515 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 CETPP11597 493 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 UBA1P22314 1058 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 CTNNA2P26232 953 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 GCLMP48507 274 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 DMTNQ08495 405 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 MAPK6Q16659 721 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 FAM187BQ17R55 369 aa9.37□□□□□ -0.91
SNRNP40-202ENST00000373720 ACAD10Q6JQN1 1059 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms