RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SLC5A5Q92911 643 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 RELTQ969Z4 430 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 CEP89Q96ST8 783 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
CHD6-202ENST00000373222 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.9□□□□□ -1.3
CHD6-202ENST00000373222 THAP2Q9H0W7 228 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 GLT8D2Q9H1C3 349 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 DPH5Q9H2P9 285 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 CENPHQ9H3R5 247 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 OLFML3Q9NRN5 406 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 TMOD4Q9NZQ9 345 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 CNTN3Q9P232 1028 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 TMEM59LQ9UK28 342 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 PSME4Q14997 1843 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 ZNF536O15090 1300 aa6.9□□□□□ -1.3
CHD6-202ENST00000373222 VGLL3A8MV65 326 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 SART1O43290 800 aaKnown RBP6.9□□□□□ -1.31
CHD6-202ENST00000373222 DAPK3O43293 454 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 TSPAN6O43657 245 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 ATP9AO75110 1047 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 BPNT1O95861 308 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 GCLMP48507 274 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 NPEPPSP55786 919 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 GNGT1P63211 74 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 PPP2R5CQ13362 524 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 NNTQ13423 1086 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 PRPF4BQ13523 1007 aaKnown RBP6.9□□□□□ -1.31
CHD6-202ENST00000373222 NFE2Q16621 373 aaPredicted RBP6.9□□□□□ -1.31
CHD6-202ENST00000373222 BRDTQ58F21 947 aaPredicted RBP6.9□□□□□ -1.31
CHD6-202ENST00000373222 PLA2G4FQ68DD2 849 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 CCDC70Q6NSX1 233 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 PEX26Q7Z412 305 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 NT5DC3Q86UY8 548 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 IQCKQ8N0W5 287 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 ALG3Q92685 438 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 BTBD6Q96KE9 485 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 NUCKS1Q9H1E3 243 aaKnown RBP6.9□□□□□ -1.31
CHD6-202ENST00000373222 ZNF408Q9H9D4 720 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 NEUROD4Q9HD90 331 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 ENAMQ9NRM1 1142 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 KCNH7Q9NS40 1196 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 TMEM51Q9NW97 253 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 COL11A1P12107 1806 aaPredicted RBP6.9□□□□□ -1.31
CHD6-202ENST00000373222 FRMPD4Q14CM0 1322 aa6.9□□□□□ -1.31
CHD6-202ENST00000373222 MYH9P35579 1960 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 K7ENM7 598 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 ZEB2O60315 1214 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 EXOC3O60645 756 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 ENTPD3O75355 529 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 H2AFZP0C0S5 128 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 EIF2AK2P19525 551 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 HPDP32754 393 aaPredicted RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 NOS2P35228 1153 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 PSMC2P35998 433 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 PRKCIP41743 596 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 MRPS9P82933 396 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 MTMR2Q13614 643 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 RASA3Q14644 834 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 C1orf220Q5T0J3 134 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 TAF3Q5VWG9 929 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 ICE2Q659A1 982 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 H2AFVQ71UI9 128 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 SULF1Q8IWU6 871 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 SLC30A5Q8TAD4 765 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 LMO3Q8TAP4 145 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 GLG1Q92896 1179 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 ZNF341Q9BYN7 854 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 INTS2Q9H0H0 1204 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 RANBP17Q9H2T7 1088 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 RAVER2Q9HCJ3 691 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 TOPORSQ9NS56 1045 aaPredicted RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 PLAAQ9Y263 795 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 STXBP5LQ9Y2K9 1186 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 ZHX2Q9Y6X8 837 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 EMSYQ7Z589 1322 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 TMEM110-MUSTN1A8MSY1 372 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 KRIT1O00522 736 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 DHX15O43143 795 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 PEX10O60683 326 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 SHOX2O60902 331 aaPredicted RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 HSF2BPO75031 334 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 CAND2O75155 1236 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 FLOT1O75955 427 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 FGGP02679 453 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 ALAS1P13196 640 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 RPL13P26373 211 aaKnown RBP6.89□□□□□ -1.31
CHD6-202ENST00000373222 SOX5P35711 763 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 USP8P40818 1118 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 SEC24CP53992 1094 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 SP4Q02446 784 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 SF3A3Q12874 501 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHD6-202ENST00000373222 DLGAP5Q15398 846 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 C2CD6Q53TS8 623 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 PRAMEF18Q5VWM3 479 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 EMBQ6PCB8 327 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 B3GNT9Q6UX72 402 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 PHLDB2Q86SQ0 1253 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 IFT20Q8IY31 132 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 ZDHHC14Q8IZN3 488 aa6.89□□□□□ -1.31
CHD6-202ENST00000373222 SYCP3Q8IZU3 236 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms