RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 ADGRA3Q8IWK6 1321 aa13.49□□□□□ -0.25
TSPAN6-201ENST00000373020 CCDC169A6NNP5 214 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 ZNF862O60290 1169 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 ZBED4O75132 1171 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 ERLIN2O94905 339 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 PYGMP11217 842 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 SEC24CP53992 1094 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 ZNF280AP59817 542 aaPredicted RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 TNFAIP1Q13829 316 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 PACS2Q86VP3 889 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 VSIG10LQ86VR7 867 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 SLC13A5Q86YT5 568 aaPredicted RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 FBXO25Q8TCJ0 367 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 ZNF653Q96CK0 615 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 RPAP3Q9H6T3 665 aaPredicted RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 KMT5AQ9NQR1 393 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 RAB20Q9NX57 234 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 TCEAL9Q9UHQ7 104 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 PCDHA10Q9Y5I2 948 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 SIP14410 1827 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 DCDC2CA8MYV0 355 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 VWA5AO00534 786 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 MAFGO15525 162 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 TRAPPC3O43617 180 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 CCND2P30279 289 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 RPL21P46778 160 aaKnown RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 FNTAP49354 379 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 PMS2P54278 862 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 GCNT1Q02742 428 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 MTMR2Q13614 643 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 C15orf39Q6ZRI6 1047 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 HOOK3Q86VS8 718 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 CPNE8Q86YQ8 564 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 REPS2Q8NFH8 660 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 PSPC1Q8WXF1 523 aaKnown RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 MAGOHBQ96A72 148 aaKnown RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 CCDC127Q96BQ5 260 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 FAM129AQ9BZQ8 928 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 RNF146Q9NTX7 359 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 PARP2Q9UGN5 583 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 CHORDC1Q9UHD1 332 aaPredicted RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 NOVA2Q9UNW9 492 aaKnown RBP13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 SNX24Q9Y343 169 aa13.48□□□□□ -0.25
TSPAN6-201ENST00000373020 C5orf60A6NFR6 353 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 MEFVO15553 781 aaPredicted RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 KCNA2P16389 499 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 GARTP22102 1010 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 PLTPP55058 493 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 MAGOHP61326 146 aaKnown RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 CLEC16AQ2KHT3 1053 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 ACAD10Q6JQN1 1059 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 CCDC137Q6PK04 289 aaKnown RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 NSMFQ6X4W1 530 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 MICALCLQ6ZW33 695 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 SV2AQ7L0J3 742 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 ENOSF1Q7L5Y1 443 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 USP37Q86T82 979 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 KCNN1Q92952 543 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 SLCO2A1Q92959 643 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 ATG4CQ96DT6 458 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 PGM2Q96G03 612 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 POP1Q99575 1024 aaKnown RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 XPNPEP1Q9NQW7 623 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 DOCK5Q9H7D0 1870 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 TCRBV7S2A1N4TA0A589 114 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 E7EVH7 732 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 SPOPO43791 374 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 COILP38432 576 aaPredicted RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 BAATQ14032 418 aaPredicted RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 BRDTQ58F21 947 aaPredicted RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 C6orf89Q6UWU4 347 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 OTUD6AQ7L8S5 288 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 TAS1R3Q7RTX0 852 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 NLRX1Q86UT6 975 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 GPD1LQ8N335 351 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 MCPH1Q8NEM0 835 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 ATP6V0A1Q93050 837 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 CYFIP2Q96F07 1278 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 WNK4Q96J92 1243 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 TMEM109Q9BVC6 243 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 CNOT10Q9H9A5 744 aaKnown RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 ARHGAP28Q9P2N2 729 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 CNOT7Q9UIV1 285 aaKnown RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 RIPK3Q9Y572 518 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 NFASCO94856 1347 aa13.47□□□□□ -0.25
TSPAN6-201ENST00000373020 GMNCA6NCL1 334 aa13.46□□□□□ -0.25
TSPAN6-201ENST00000373020 TULP1O00294 542 aaPredicted RBP13.46□□□□□ -0.25
TSPAN6-201ENST00000373020 DKC1O60832 514 aaKnown RBP eCLIP13.46□□□□□ -0.25
TSPAN6-201ENST00000373020 RGS20O76081 388 aa13.46□□□□□ -0.25
TSPAN6-201ENST00000373020 SHBGP04278 402 aa13.46□□□□□ -0.25
TSPAN6-201ENST00000373020 NR3C2P08235 984 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms