RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 LOC285556D6RIA3 1793 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 GTF2H1P32780 548 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 HSPA9P38646 679 aaKnown RBP20.16■□□□□ 0.82
USP49-202ENST00000373010 LIG4P49917 911 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 WNT7BP56706 349 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 TCEAL1Q15170 157 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 LRRC31Q6UY01 552 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 CCDC26Q8TAB7 109 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 ASAP3Q8TDY4 903 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 BTBD6Q96KE9 485 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 COMTP21964 271 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 CDR2Q01850 454 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 POU5F1Q01860 360 aaKnown RBP20.15■□□□□ 0.82
USP49-202ENST00000373010 VGLL4Q14135 290 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 MAATS1Q7Z4T9 603 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 TRIM51Q9BSJ1 452 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 MYPNQ86TC9 1320 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 OATP04181 439 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 KRT5P13647 590 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 PDE6CP51160 858 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 DNAJC21Q5F1R6 531 aaKnown RBP20.15■□□□□ 0.82
USP49-202ENST00000373010 SH3D19Q5HYK7 790 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 KCTD16Q68DU8 428 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 FOXR1Q6PIV2 292 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 USP37Q86T82 979 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 SH2D3CQ8N5H7 860 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 DDX1Q92499 740 aaKnown RBP20.15■□□□□ 0.82
USP49-202ENST00000373010 DPH5Q9H2P9 285 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 BTBD7Q9P203 1132 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 PPP2R3BQ9Y5P8 575 aa20.15■□□□□ 0.82
USP49-202ENST00000373010 MAFBQ9Y5Q3 323 aaPredicted RBP20.15■□□□□ 0.82
USP49-202ENST00000373010 FLT3P36888 993 aa20.14■□□□□ 0.82
USP49-202ENST00000373010 EIF1ADQ8N9N8 165 aaKnown RBP20.14■□□□□ 0.82
USP49-202ENST00000373010 CHST13Q8NET6 341 aa20.14■□□□□ 0.82
USP49-202ENST00000373010 ZNF653Q96CK0 615 aa20.14■□□□□ 0.82
USP49-202ENST00000373010 NUP85Q9BW27 656 aa20.14■□□□□ 0.82
USP49-202ENST00000373010 TRPC6Q9Y210 931 aa20.14■□□□□ 0.82
USP49-202ENST00000373010 EXTL3O43909 919 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 ATG7O95352 703 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 GLRA2P23416 452 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 ICAM3P32942 547 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 ACOT2P49753 483 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 ALDH5A1P51649 535 aaPredicted RBP20.14■□□□□ 0.81
USP49-202ENST00000373010 NLRP11P59045 1033 aaKnown RBP20.14■□□□□ 0.81
USP49-202ENST00000373010 PTENP60484 403 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.14■□□□□ 0.81
USP49-202ENST00000373010 ZBTB45Q96K62 511 aaPredicted RBP20.14■□□□□ 0.81
USP49-202ENST00000373010 ZSWIM1Q9BR11 485 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 TRIM31Q9BZY9 425 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 HAPLN2Q9GZV7 340 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 PLAAQ9Y263 795 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 PTPRFP10586 1907 aa20.14■□□□□ 0.81
USP49-202ENST00000373010 LRRIQ4A6NIV6 560 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 UBL4BQ8N7F7 174 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 DNERQ8NFT8 737 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 ZNF564Q8TBZ8 553 aaPredicted RBP20.13■□□□□ 0.81
USP49-202ENST00000373010 MIF4GDA9UHW6 222 aaKnown RBP20.13■□□□□ 0.81
USP49-202ENST00000373010 H0YCG3 227 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 GRIN3BO60391 1043 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 RPS6KA5O75582 802 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 MTA2O94776 668 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 CLSTN1O94985 981 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 CYP1A2P05177 515 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 HSD17B3P37058 310 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 STRN3Q13033 797 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 LBX2Q6XYB7 198 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 C15orf39Q6ZRI6 1047 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 GPC2Q8N158 579 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 NAP1L3Q99457 506 aaPredicted RBP20.13■□□□□ 0.81
USP49-202ENST00000373010 PORCNQ9H237 461 aa20.13■□□□□ 0.81
USP49-202ENST00000373010 DHX33Q9H6R0 707 aaKnown RBP20.13■□□□□ 0.81
USP49-202ENST00000373010 UBA1P22314 1058 aaKnown RBP20.12■□□□□ 0.81
USP49-202ENST00000373010 UAP1Q16222 522 aaPredicted RBP20.12■□□□□ 0.81
USP49-202ENST00000373010 PSPC1Q8WXF1 523 aaKnown RBP20.12■□□□□ 0.81
USP49-202ENST00000373010 RPS6KC1Q96S38 1066 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 AGO2Q9UKV8 859 aaKnown RBP20.12■□□□□ 0.81
USP49-202ENST00000373010 UTP11Q9Y3A2 253 aaKnown RBP20.12■□□□□ 0.81
USP49-202ENST00000373010 PTPRJQ12913 1337 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 TNNI1P19237 187 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 PEX5P50542 639 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 ZBTB41Q5SVQ8 909 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 DEPTORQ8TB45 409 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 SEC14L1Q92503 715 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 GLG1Q92896 1179 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 PCYT2Q99447 389 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 C1orf112Q9NSG2 853 aa20.12■□□□□ 0.81
USP49-202ENST00000373010 GOLGA6L10A0A0M3HER8 536 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 GSTTP1A0A1W2PQM5 241 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 SHOX2O60902 331 aaPredicted RBP20.11■□□□□ 0.81
USP49-202ENST00000373010 DR1Q01658 176 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 GCNT1Q02742 428 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 PSMD6Q15008 389 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 TTC19Q6DKK2 380 aaPredicted RBP20.11■□□□□ 0.81
USP49-202ENST00000373010 SPOPLQ6IQ16 392 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 ACAD10Q6JQN1 1059 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 CRELD2Q6UXH1 353 aaPredicted RBP20.11■□□□□ 0.81
USP49-202ENST00000373010 CD302Q8IX05 232 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 FNBP1Q96RU3 617 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 CEP89Q96ST8 783 aa20.11■□□□□ 0.81
USP49-202ENST00000373010 TARS2Q9BW92 718 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms