RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 MYH11P35749 1972 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 ARP10275 920 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 RWDD2BP57060 319 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 FMO1Q01740 532 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 CETN1Q12798 172 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 TNIP1Q15025 636 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 SP8Q8IXZ3 490 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 PPM1KQ8N3J5 372 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 PSPC1Q8WXF1 523 aaKnown RBP17.55■□□□□ 0.4
SDC4-201ENST00000372733 ELMO3Q96BJ8 720 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 PWWP2AQ96N64 755 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 TRIM33Q9UPN9 1127 aa17.55■□□□□ 0.4
SDC4-201ENST00000372733 ANP32DO95626 131 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 GH2P01242 217 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 KRT16P08779 473 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 RBM5P52756 815 aaKnown RBP eCLIP17.54■□□□□ 0.4
SDC4-201ENST00000372733 SEPT14Q6ZU15 432 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 SPATA21Q7Z572 469 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 KLHL29Q96CT2 875 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 SERPINB12Q96P63 405 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 LRRC19Q9H756 370 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 CHST7Q9NS84 486 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 PKD2L1Q9P0L9 805 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 C15orf41Q9Y2V0 281 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 A0A1W2PRG0 241 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 CYP1A2P05177 515 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 MXI1P50539 228 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 ADCY1Q08828 1119 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 RASA3Q14644 834 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 KYNUQ16719 465 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 TATDN1Q6P1N9 297 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 RHBDF2Q6PJF5 856 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 FAM71AQ8IYT1 594 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 MORC4Q8TE76 937 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 L3MBTL3Q96JM7 780 aaPredicted RBP17.54■□□□□ 0.4
SDC4-201ENST00000372733 RMDN2Q96LZ7 410 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 ZNF577Q9BSK1 485 aa17.54■□□□□ 0.4
SDC4-201ENST00000372733 A0A1B0GUA9 196 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 ADRA2BP18089 450 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 VPS41P49754 854 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 COPS2P61201 443 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 MAP2K1Q02750 393 aaPredicted RBP17.53■□□□□ 0.4
SDC4-201ENST00000372733 BNIP1Q12981 228 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 CCDC174Q6PII3 467 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 FAM212AQ96EL1 285 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 HERPUD2Q9BSE4 406 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 TMEM117Q9H0C3 514 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 WHRNQ9P202 907 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 STK38LQ9Y2H1 464 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 GZMAP12544 262 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 ALADP13716 330 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 PAX7P23759 505 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 CRYMQ14894 314 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 VPS72Q15906 364 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 PADI6Q6TGC4 694 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 CYP4X1Q8N118 509 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 FITM2Q8N6M3 262 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 CKAP2Q8WWK9 683 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 RSRC1Q96IZ7 334 aaKnown RBP17.53■□□□□ 0.4
SDC4-201ENST00000372733 ZDHHC15Q96MV8 337 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 HSPBP1Q9NZL4 362 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 TBK1Q9UHD2 729 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 GTF3C4Q9UKN8 822 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 LY75O60449 1722 aa17.53■□□□□ 0.4
SDC4-201ENST00000372733 G3V3G9 751 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 GJB6O95452 261 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 CALCAP01258 141 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 ADRB2P07550 413 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 CETPP11597 493 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 BRAFP15056 766 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 PSEN1P49768 467 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 ITGA8P53708 1063 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 CEP55Q53EZ4 464 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 CGB2Q6NT52 195 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 SEMA4DQ92854 862 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 TGS1Q96RS0 853 aaKnown RBP17.52■□□□□ 0.4
SDC4-201ENST00000372733 SH2D3AQ9BRG2 576 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 TRIM7Q9C029 511 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 DBNDD1Q9H9R9 158 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 KCND2Q9NZV8 630 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 ARL2BPQ9Y2Y0 163 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
SDC4-201ENST00000372733 SNF8Q96H20 258 aa17.52■□□□□ 0.4
SDC4-201ENST00000372733 THAP12O43422 761 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 TTC4O95801 387 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 IVDP26440 423 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 MYBPC2Q14324 1141 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 XXYLT1Q8NBI6 393 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 CCHCR1Q8TD31 782 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 NINJ2Q9NZG7 142 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 FSCN2O14926 492 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 P4HA2O15460 535 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 POLR2MP0CAP2 368 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 CYP11B1P15538 503 aa17.51■□□□□ 0.39
SDC4-201ENST00000372733 MGAT5Q09328 741 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms