RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 SF3A3Q12874 501 aaKnown RBP eCLIP10.73□□□□□ -0.69
KDM4A-201ENST00000372396 GIT2Q14161 759 aa10.73□□□□□ -0.69
KDM4A-201ENST00000372396 KIF22Q14807 665 aa10.73□□□□□ -0.69
KDM4A-201ENST00000372396 IL17AQ16552 155 aa10.73□□□□□ -0.69
KDM4A-201ENST00000372396 FAM133BQ5BKY9 247 aaKnown RBP10.73□□□□□ -0.69
KDM4A-201ENST00000372396 ANKRD20A8PQ5CZ79 823 aa10.73□□□□□ -0.69
KDM4A-201ENST00000372396 ALKBH5Q6P6C2 394 aaKnown RBP10.73□□□□□ -0.69
KDM4A-201ENST00000372396 SLC51AQ86UW1 340 aa10.73□□□□□ -0.69
KDM4A-201ENST00000372396 NAF1Q96HR8 494 aaKnown RBP10.73□□□□□ -0.69
KDM4A-201ENST00000372396 C17orf75Q9HAS0 396 aa10.73□□□□□ -0.69
KDM4A-201ENST00000372396 PXMP2Q9NR77 195 aa10.73□□□□□ -0.69
KDM4A-201ENST00000372396 NOD1Q9Y239 953 aa10.73□□□□□ -0.69
KDM4A-201ENST00000372396 KCNK3O14649 394 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 MDH1P40925 334 aaKnown RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 YARSP54577 528 aaKnown RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 TLDC1Q6P9B6 456 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SH2D3CQ8N5H7 860 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 PHC3Q8NDX5 983 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SPATA20Q8TB22 786 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 KLHL29Q96CT2 875 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 NACA2Q9H009 215 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SLC38A10Q9HBR0 1119 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 ATXN10Q9UBB4 475 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 ZNF711Q9Y462 761 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SSU72P8A0A1W2PR75 194 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 A0A1W2PRG0 241 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 LRRN2O75325 713 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SUPT3HO75486 399 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 STAT5BP51692 787 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 NPY5RQ15761 445 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 DCUN1D2Q6PH85 259 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 DNAJC14Q6Y2X3 702 aaPredicted RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 RUFY4Q6ZNE9 571 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SEPT1Q8WYJ6 367 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 RUSC1Q9BVN2 902 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 AGO4Q9HCK5 861 aaKnown RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 DLGAP2Q9P1A6 1054 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 ADAMTS1Q9UHI8 967 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 MYH7P12883 1935 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 CCDC160A6NGH7 325 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 PTPRAP18433 802 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 RFC5P40937 340 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 NSFP46459 744 aaKnown RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 CALCOCO2Q13137 446 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 MAPK6Q16659 721 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 FIGNQ5HY92 759 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 ZFAND2BQ8WV99 257 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 INTS2Q9H0H0 1204 aaKnown RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 UTP11Q9Y3A2 253 aaKnown RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SMAPO00193 183 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 CXCL11O14625 94 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 OPLAHO14841 1288 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 ATF7P17544 494 aaPredicted RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 MARK3P27448 753 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 EPHX2P34913 555 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 EFNA5P52803 228 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 CCDC15Q0P6D6 951 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
KDM4A-201ENST00000372396 CYFIP1Q7L576 1253 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 MIS12Q9H081 205 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SEMA6BQ9H3T3 888 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 GGA2Q9UJY4 613 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 ITGB1BP2Q9UKP3 347 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 WDR37Q9Y2I8 494 aa10.72□□□□□ -0.69
KDM4A-201ENST00000372396 SHANK3Q9BYB0 1731 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 HMGB1P1B2RPK0 211 aaPredicted RBP10.71□□□□□ -0.69
KDM4A-201ENST00000372396 WNT7AO00755 349 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 MOCS3O95396 460 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 VIMP08670 466 aaKnown RBP10.71□□□□□ -0.69
KDM4A-201ENST00000372396 CETPP11597 493 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 ELF3P78545 371 aaPredicted RBP10.71□□□□□ -0.69
KDM4A-201ENST00000372396 KRT39Q6A163 491 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 ZNF280DQ6N043 979 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 GPD1LQ8N335 351 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 HAS1Q92839 578 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 SPATA33Q96N06 139 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 DNAJC18Q9H819 358 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 OLFML3Q9NRN5 406 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 DBR1Q9UK59 544 aaKnown RBP10.71□□□□□ -0.69
KDM4A-201ENST00000372396 PCDHB4Q9Y5E5 795 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 DDNO94850 711 aaPredicted RBP10.71□□□□□ -0.69
KDM4A-201ENST00000372396 GGPS1O95749 300 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 SLURP2P0DP57 97 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 ZNF280AP59817 542 aaPredicted RBP10.71□□□□□ -0.69
KDM4A-201ENST00000372396 RNASE9P60153 205 aaKnown RBP10.71□□□□□ -0.69
KDM4A-201ENST00000372396 PRKCEQ02156 737 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 EHHADHQ08426 723 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 PGM5Q15124 567 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 PPP1R15BQ5SWA1 713 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 EMBQ6PCB8 327 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 OTOP1Q7RTM1 612 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 LONP2Q86WA8 852 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 DNERQ8NFT8 737 aa10.71□□□□□ -0.69
KDM4A-201ENST00000372396 RNPC3Q96LT9 517 aaKnown RBP10.71□□□□□ -0.69
KDM4A-201ENST00000372396 DDX60Q8IY21 1712 aaKnown RBP10.71□□□□□ -0.7
KDM4A-201ENST00000372396 ENC1O14682 589 aa10.71□□□□□ -0.7
KDM4A-201ENST00000372396 SRGAP2CP0DJJ0 459 aa10.71□□□□□ -0.7
KDM4A-201ENST00000372396 POLR2BP30876 1174 aaKnown RBP10.71□□□□□ -0.7
KDM4A-201ENST00000372396 GCLMP48507 274 aa10.71□□□□□ -0.7
KDM4A-201ENST00000372396 SKOR1P84550 965 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms