RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 TMEM192Q8IY95 271 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 USP38Q8NB14 1042 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 PLEKHO2Q8TD55 490 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 SLC35C1Q96A29 364 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 CCDC127Q96BQ5 260 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 TRIM6Q9C030 488 aaPredicted RBP12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 VPS16Q9H269 839 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 TMX1Q9H3N1 280 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 NXF3Q9H4D5 531 aaKnown RBP12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 KIAA1586Q9HCI6 787 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 PRDM5Q9NQX1 630 aaPredicted RBP12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 TMEM39AQ9NV64 488 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 SQORQ9Y6N5 450 aa12.53□□□□□ -0.4
CALCOCO2-202ENST00000372317 ZNF233A6NK53 670 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 CBFA2T2O43439 604 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 MGEA5O60502 916 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 NBNO60934 754 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 ADCY5O95622 1261 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 LDHAP00338 332 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 STAG3L1P0CL83 205 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 CXCL8P10145 99 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 GRM5P41594 1212 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 VAMP7P51809 220 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 CCL23P55773 120 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 DLG4P78352 724 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 DSC3Q14574 896 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 PSMD6Q15008 389 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 ENOX2Q16206 610 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 PTPN21Q16825 1174 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 FILIP1LQ4L180 1135 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 VWA3BQ502W6 1294 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 ABHD8Q96I13 439 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 SCLYQ96I15 445 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 MFSD14AQ96MC6 490 aa12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 TOPORSQ9NS56 1045 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-202ENST00000372317 LRRIQ3A6PVS8 624 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 AFPP02771 609 aaKnown RBP12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 TPM3P06753 285 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 CLTAP09496 248 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 DLATP10515 647 aaKnown RBP12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 MYL7Q01449 175 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 GPNMBQ14956 572 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 C1orf220Q5T0J3 134 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 TMC2Q8TDI7 906 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 MRFAP1L1Q96HT8 127 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 CCDC94Q9BW85 323 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 APOL6Q9BWW8 343 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 NDST4Q9H3R1 872 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 PDE11AQ9HCR9 933 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 CHST12Q9NRB3 414 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 HES2Q9Y543 173 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 IPPQ9Y573 584 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 PTPRJQ12913 1337 aa12.51□□□□□ -0.41
CALCOCO2-202ENST00000372317 LRRC10BA6NIK2 292 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 KIAA0355O15063 1070 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 TEX33O43247 280 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 RECQL4O94761 1208 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 ZSCAN20P17040 1043 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 IBSPP21815 317 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 UBXN1Q04323 297 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 PPP2R3AQ06190 1150 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 PPP3CAQ08209 521 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 KYAT1Q16773 422 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 FKBP15Q5T1M5 1219 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 LMBRD2Q68DH5 695 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 USP37Q86T82 979 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 SMG8Q8ND04 991 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 PARD3BQ8TEW8 1205 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 SNX27Q96L92 541 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 ADAM2Q99965 735 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 FAM105AQ9NUU6 356 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 SNTG2Q9NY99 539 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 PCDHB2Q9Y5E7 798 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 RALGAPA2Q2PPJ7 1873 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
CALCOCO2-202ENST00000372317 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 NFICP08651 508 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 ITGB8P26012 769 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 GCLMP48507 274 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 MXI1P50539 228 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 RAB27AP51159 221 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 ENPEPQ07075 957 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 KCNH2Q12809 1159 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 NR1I3Q14994 352 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 TCTN1Q2MV58 587 aa12.49□□□□□ -0.41
CALCOCO2-202ENST00000372317 CBWD6Q4V339 395 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms