RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 FBXL13Q8NEE6 735 aa18.98■□□□□ 0.63
SSBP3-203ENST00000371319 VTI1AQ96AJ9 217 aa18.98■□□□□ 0.63
SSBP3-203ENST00000371319 INO80BQ9C086 356 aaPredicted RBP18.98■□□□□ 0.63
SSBP3-203ENST00000371319 AKT3Q9Y243 479 aa18.98■□□□□ 0.63
SSBP3-203ENST00000371319 DUSP10Q9Y6W6 482 aa18.98■□□□□ 0.63
SSBP3-203ENST00000371319 A0A087WZ62 844 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 TULP1O00294 542 aaPredicted RBP18.97■□□□□ 0.63
SSBP3-203ENST00000371319 C4BPAP04003 597 aaKnown RBP18.97■□□□□ 0.63
SSBP3-203ENST00000371319 VTNP04004 478 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 ANXA13P27216 316 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 TMOD1P28289 359 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 PSMC4P43686 418 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 PHKA2P46019 1235 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 LACTBP83111 547 aaPredicted RBP18.97■□□□□ 0.63
SSBP3-203ENST00000371319 KIF5AQ12840 1032 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 PRPF4BQ13523 1007 aaKnown RBP18.97■□□□□ 0.63
SSBP3-203ENST00000371319 FAM187BQ17R55 369 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 SEZ6Q53EL9 994 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 LMBRD2Q68DH5 695 aaPredicted RBP18.97■□□□□ 0.63
SSBP3-203ENST00000371319 KAT5Q92993 513 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 CGRRF1Q99675 332 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 FDXACB1Q9BRP7 624 aaPredicted RBP18.97■□□□□ 0.63
SSBP3-203ENST00000371319 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.97■□□□□ 0.63
SSBP3-203ENST00000371319 RAB20Q9NX57 234 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 GABRQQ9UN88 632 aa18.97■□□□□ 0.63
SSBP3-203ENST00000371319 RRN3P2A6NIE6 340 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 HAS3O00219 553 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 FOXN3O00409 490 aaPredicted RBP18.96■□□□□ 0.63
SSBP3-203ENST00000371319 OGTO15294 1046 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 URI1O94763 535 aaPredicted RBP18.96■□□□□ 0.63
SSBP3-203ENST00000371319 SMIM10L2AP0DMW4 78 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 SMIM10L2BP0DMW5 78 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 TNFSF9P41273 254 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 NOGQ13253 232 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 KIF22Q14807 665 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 AMHR2Q16671 573 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 ZACNQ401N2 412 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 ATF7IP2Q5U623 682 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 EEF1DP3Q658K8 133 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 MPZL3Q6UWV2 235 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 BRSK2Q8IWQ3 736 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 KIAA0319LQ8IZA0 1049 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 HELQQ8TDG4 1101 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 LMBR1Q8WVP7 490 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 KREMEN1Q96MU8 473 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 FNBP1Q96RU3 617 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 PPP1R16BQ96T49 567 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 SYT11Q9BT88 431 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 SETD4Q9NVD3 440 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 PRMT7Q9NVM4 692 aaPredicted RBP18.96■□□□□ 0.63
SSBP3-203ENST00000371319 ADAMTS1Q9UHI8 967 aa18.96■□□□□ 0.63
SSBP3-203ENST00000371319 CTIFO43310 598 aaKnown RBP18.95■□□□□ 0.62
SSBP3-203ENST00000371319 PSEN2P49810 448 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 CPT1AP50416 773 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 MFSD10Q14728 455 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 KIAA0753Q2KHM9 967 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 TDRD10Q5VZ19 366 aaKnown RBP18.95■□□□□ 0.62
SSBP3-203ENST00000371319 FMNL3Q8IVF7 1028 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 TCHPQ9BT92 498 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 AP5M1Q9H0R1 490 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.95■□□□□ 0.627e-7■■■■■ 133.4
SSBP3-203ENST00000371319 CPSF3Q9UKF6 684 aaKnown RBP18.95■□□□□ 0.62
SSBP3-203ENST00000371319 TNFSF13BQ9Y275 285 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 ANK1P16157 1881 aa18.95■□□□□ 0.62
SSBP3-203ENST00000371319 VNN1O95497 513 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 TBC1D8O95759 1140 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 TNNI1P19237 187 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 BEX3Q00994 111 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 CAP1Q01518 475 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 LNX1Q8TBB1 728 aaPredicted RBP18.94■□□□□ 0.62
SSBP3-203ENST00000371319 TRIB2Q92519 343 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 TATDN2Q93075 761 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 NT5C1BQ96P26 610 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 MAP7D2Q96T17 732 aa18.94■□□□□ 0.62
SSBP3-203ENST00000371319 CTAGE9A4FU28 777 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 DDX3XO00571 662 aaKnown RBP eCLIP18.93■□□□□ 0.625e-8■■□□□ 11.6
SSBP3-203ENST00000371319 ZC3H11AO75152 810 aaKnown RBP eCLIP18.93■□□□□ 0.621e-8■□□□□ 9.1
SSBP3-203ENST00000371319 HLA-DRAP01903 254 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 MYL3P08590 195 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 CYBAP13498 195 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 AKR1A1P14550 325 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 HIC1Q14526 733 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 NFRKBQ6P4R8 1299 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 TXLNBQ8N3L3 684 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 SLC30A5Q8TAD4 765 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 PPP1R13LQ8WUF5 828 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 SECISBP2LQ93073 1101 aaKnown RBP18.93■□□□□ 0.62
SSBP3-203ENST00000371319 CAPNS2Q96L46 248 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 NAPGQ99747 312 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-203ENST00000371319 CDT1Q9H211 546 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 NAGPAQ9UK23 515 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 MRFAP1Q9Y605 127 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 ATP8B3O60423 1300 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 NRCAMQ92823 1304 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 CASP8AP2Q9UKL3 1982 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 MACROD2A1Z1Q3 448 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 MBLAC1A4D2B0 266 aaPredicted RBP18.93■□□□□ 0.62
SSBP3-203ENST00000371319 ZEB2O60315 1214 aa18.93■□□□□ 0.62
SSBP3-203ENST00000371319 CSDE1O75534 798 aaKnown RBP18.93■□□□□ 0.62
SSBP3-203ENST00000371319 SLU7O95391 586 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms