RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 RAD18Q9NS91 495 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 FGFR1OP2Q9NVK5 253 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 MAP3K20Q9NYL2 800 aaKnown RBP13.27□□□□□ -0.28
TMEM56-201ENST00000370203 V9GYQ6 96 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 C1orf146Q5VVC0 180 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 MAGEB10Q96LZ2 347 aaPredicted RBP13.27□□□□□ -0.28
TMEM56-201ENST00000370203 MCEEQ96PE7 176 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 TEKT2Q9UIF3 430 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 HACL1Q9UJ83 578 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 MYO3BQ8WXR4 1341 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 SPDYE5A6NIY4 337 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 SYCE1LA8MT33 242 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 SPTLC1O15269 473 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 KRT37O76014 449 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 SPDYE7PQ495Y7 208 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 ACAD11Q709F0 780 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 TRIML2Q8N7C3 387 aa13.27□□□□□ -0.28
TMEM56-201ENST00000370203 MAPK13O15264 365 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 MAP3K6O95382 1288 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 SLC8A1P32418 973 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 ARL4DP49703 201 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 ELMO2Q96JJ3 720 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 DACH2Q96NX9 599 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.27□□□□□ -0.29
TMEM56-201ENST00000370203 IP6K2Q9UHH9 426 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 STAP1Q9ULZ2 295 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 ADGBQ8N7X0 1667 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 CENPAP49450 140 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 GMPSP49915 693 aaPredicted RBP13.27□□□□□ -0.29
TMEM56-201ENST00000370203 C6orf118Q5T5N4 469 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 FAM136AQ96C01 138 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 ABHD8Q96I13 439 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 HUNKP57058 714 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 EIF3EP60228 445 aaKnown RBP13.27□□□□□ -0.29
TMEM56-201ENST00000370203 TTC23LQ6PF05 361 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 MB21D2Q8IYB1 491 aaPredicted RBP13.27□□□□□ -0.29
TMEM56-201ENST00000370203 DCUN1D1Q96GG9 259 aa13.27□□□□□ -0.29
TMEM56-201ENST00000370203 GTPBP10A4D1E9 387 aaKnown RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 BTBD6Q96KE9 485 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 SRPK1Q96SB4 655 aaKnown RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 UPF3AQ9H1J1 476 aaKnown RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 SPON1Q9HCB6 807 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 TXLNGQ9NUQ3 528 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 DAGLAQ9Y4D2 1042 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 PCDHA10Q9Y5I2 948 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 LGALS16A8MUM7 142 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 YY1P25490 414 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 KRT17Q04695 432 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 SPARCL1Q14515 664 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 NAALADL2Q58DX5 795 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 CDC42EP5Q6NZY7 148 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 FBXO38Q6PIJ6 1188 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 CEP70Q8NHQ1 597 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 BTN2A2Q8WVV5 523 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 ELMO3Q96BJ8 720 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 HSPBP1Q9NZL4 362 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 TRIM10Q9UDY6 481 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 MARCOQ9UEW3 520 aaPredicted RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 PRG3Q9Y2Y8 225 aaPredicted RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 UBE2Q2LH0YL09 131 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 ABCD1P33897 745 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 KRT39Q6A163 491 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 CCDC137Q6PK04 289 aaKnown RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 CCDC124Q96CT7 223 aaKnown RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 APOL5Q9BWW9 433 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 C2orf40Q9H1Z8 148 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 SENP2Q9HC62 589 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 CDC42BPGQ6DT37 1551 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 CTIFO43310 598 aaKnown RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 WEE1P30291 646 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 RFX3P48380 749 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 TWF1Q12792 350 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 EFTUD2Q15029 972 aaKnown RBP eCLIP13.26□□□□□ -0.292e-7■■■□□ 17.4
TMEM56-201ENST00000370203 MFSD4BQ5TF39 518 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 GJB7Q6PEY0 223 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 FAM180AQ6UWF9 173 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 SHCBP1LQ9BZQ2 653 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 ZNF70Q9UC06 446 aaPredicted RBP13.26□□□□□ -0.29
TMEM56-201ENST00000370203 AURKCQ9UQB9 309 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 CCL15-CCL14A0A0B4J2E2 113 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 TLR2O60603 784 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 RPS6KA5O75582 802 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 NPTXRO95502 500 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 DPEP1P16444 411 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 CCL15Q16663 113 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 SERPINI1Q99574 410 aa13.26□□□□□ -0.29
TMEM56-201ENST00000370203 EPB42P16452 691 aa13.25□□□□□ -0.29
TMEM56-201ENST00000370203 ESRRGP62508 458 aa13.25□□□□□ -0.29
TMEM56-201ENST00000370203 IZUMO3Q5VZ72 239 aa13.25□□□□□ -0.29
TMEM56-201ENST00000370203 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
TMEM56-201ENST00000370203 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
TMEM56-201ENST00000370203 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.25□□□□□ -0.29
TMEM56-201ENST00000370203 PLIN5Q00G26 463 aa13.25□□□□□ -0.29
TMEM56-201ENST00000370203 APBA1Q02410 837 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms