RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 LAMTOR5O43504 91 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 NPTXRO95502 500 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 C8AP07357 584 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 AXLP30530 894 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 CYP4A11Q02928 519 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 GRIK3Q13003 919 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 CTTNQ14247 550 aaKnown RBP17.13■□□□□ 0.33
SSR4-204ENST00000370087 SLC44A4Q53GD3 710 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 XKR9Q5GH70 373 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 POTEHQ6S545 545 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 C4orf19Q8IY42 314 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 GPR65Q8IYL9 337 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 TCP11Q8WWU5 503 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 SHDQ96IW2 340 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 MTRQ99707 1265 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 BCO2Q9BYV7 579 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
SSR4-204ENST00000370087 LTB4R2Q9NPC1 389 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 KCNJ14Q9UNX9 436 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 SMG5Q9UPR3 1016 aaKnown RBP17.13■□□□□ 0.33
SSR4-204ENST00000370087 PPME1Q9Y570 386 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 ZFP37Q9Y6Q3 630 aaPredicted RBP17.13■□□□□ 0.33
SSR4-204ENST00000370087 SHISA7A6NL88 538 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 FAM170BA6NMN3 283 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 ASAP2O43150 1006 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 NR1I2O75469 434 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 KIF4AO95239 1232 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 TGM1P22735 817 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 IGFBP6P24592 240 aaPredicted RBP17.12■□□□□ 0.33
SSR4-204ENST00000370087 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
SSR4-204ENST00000370087 HSPA4P34932 840 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 EVCP57679 992 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 PRKCQQ04759 706 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 SPIRE1Q08AE8 756 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
SSR4-204ENST00000370087 HSP90AA2PQ14568 343 aaPredicted RBP17.12■□□□□ 0.33
SSR4-204ENST00000370087 NCAPH2Q6IBW4 605 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 IFNLR1Q8IU57 520 aaPredicted RBP17.12■□□□□ 0.33
SSR4-204ENST00000370087 ZBTB44Q8NCP5 570 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
SSR4-204ENST00000370087 NELL1Q92832 810 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 LARP6Q9BRS8 491 aaKnown RBP17.12■□□□□ 0.33
SSR4-204ENST00000370087 PARD6AQ9NPB6 346 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 PCDHGA2Q9Y5H1 932 aa17.12■□□□□ 0.33
SSR4-204ENST00000370087 CASTOR2A6NHX0 329 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 DTNBO60941 627 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 LILRB5O75023 590 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 CDC45O75419 566 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 TADA2AO75478 443 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 CREMQ03060 361 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
SSR4-204ENST00000370087 EPHA7Q15375 998 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 PSMD5Q16401 504 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 PPM1LQ5SGD2 360 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 MTSS1LQ765P7 747 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 NPAS3Q8IXF0 933 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 EXOC8Q8IYI6 725 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 ING5Q8WYH8 240 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 PLA2G2FQ9BZM2 168 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 TRIM6Q9C030 488 aaPredicted RBP17.11■□□□□ 0.33
SSR4-204ENST00000370087 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 POLIQ9UNA4 740 aa17.11■□□□□ 0.33
SSR4-204ENST00000370087 SF3B1O75533 1304 aaKnown RBP eCLIP17.11■□□□□ 0.33
SSR4-204ENST00000370087 TICRRQ7Z2Z1 1910 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 TTLL13PA6NNM8 815 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 DKC1O60832 514 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSR4-204ENST00000370087 HNRNPA1P09651 372 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSR4-204ENST00000370087 GLRA2P23416 452 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 FZD5Q13467 585 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
SSR4-204ENST00000370087 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 FAM171A1Q5VUB5 890 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 KRT25Q7Z3Z0 450 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 SLC7A14Q8TBB6 771 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 PIK3R5Q8WYR1 880 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 TTPALQ9BTX7 342 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 OSBPL6Q9BZF3 934 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 PRMT8Q9NR22 394 aaPredicted RBP17.1■□□□□ 0.33
SSR4-204ENST00000370087 GJB4Q9NTQ9 266 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 ZSCAN32Q9NX65 697 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 PARP2Q9UGN5 583 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 CFAP47Q6ZTR5 3102 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 TPRP12270 2363 aaKnown RBP17.1■□□□□ 0.33
SSR4-204ENST00000370087 ACACBO00763 2458 aa17.1■□□□□ 0.33
SSR4-204ENST00000370087 DCDC2BA2VCK2 349 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 PTGESO14684 152 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 DEXIO95424 95 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 ARL2P36404 184 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 MXD4Q14582 209 aaPredicted RBP17.09■□□□□ 0.33
SSR4-204ENST00000370087 PCBP1Q15365 356 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■□□ 17.3
SSR4-204ENST00000370087 NAB2Q15742 525 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 SLC27A1Q6PCB7 646 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 RSPO2Q6UXX9 243 aaPredicted RBP17.09■□□□□ 0.33
SSR4-204ENST00000370087 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
SSR4-204ENST00000370087 OXER1Q8TDS5 423 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms