RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CITO14578 2027 aa22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 CACNB1Q02641 598 aaPredicted RBP22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 SMAD4Q13485 552 aaKnown RBP22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 SMAD2Q15796 467 aaKnown RBP22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 XKR4Q5GH76 650 aa22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 ALYREFQ86V81 257 aaKnown RBP22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 LARP4BQ92615 738 aaKnown RBP22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 TARS2Q9BW92 718 aaKnown RBP22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 CDT1Q9H211 546 aa22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 CD320Q9NPF0 282 aa22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 C11orf16Q9NQ32 467 aa22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 CD207Q9UJ71 328 aa22.57■■□□□ 1.2
SMNDC1-201ENST00000369592 MUC6Q6W4X9 2439 aa22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 F8W810 466 aa22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 CLASP2O75122 1294 aaKnown RBP22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 CXCL14O95715 111 aa22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 ZSCAN22P10073 491 aaPredicted RBP22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 PTPN14Q15678 1187 aa22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 ALKAL1Q6UXT8 129 aa22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 EP400NLQ6ZTU2 488 aa22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 KRI1Q8N9T8 703 aaKnown RBP22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 LARSQ9P2J5 1176 aaKnown RBP22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 STK17AQ9UEE5 414 aa22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 BARX2Q9UMQ3 279 aaPredicted RBP22.56■■□□□ 1.2
SMNDC1-201ENST00000369592 GRM5P41594 1212 aa22.55■■□□□ 1.2
SMNDC1-201ENST00000369592 NDUFV1P49821 464 aa22.55■■□□□ 1.2
SMNDC1-201ENST00000369592 PKP1Q13835 747 aa22.55■■□□□ 1.2
SMNDC1-201ENST00000369592 CEP120Q8N960 986 aa22.55■■□□□ 1.2
SMNDC1-201ENST00000369592 AUTS2Q8WXX7 1259 aa22.55■■□□□ 1.2
SMNDC1-201ENST00000369592 KHSRPQ92945 711 aaKnown RBP eCLIP22.55■■□□□ 1.2
SMNDC1-201ENST00000369592 S1PR5Q9H228 398 aa22.55■■□□□ 1.2
SMNDC1-201ENST00000369592 PRG3Q9Y2Y8 225 aaPredicted RBP22.55■■□□□ 1.2
SMNDC1-201ENST00000369592 PDCD11Q14690 1871 aaKnown RBP22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 A0A087X0B3 334 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 C19orf67A6NJJ6 358 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 MEFVO15553 781 aaPredicted RBP22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 PPP6R2O75170 966 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 F13A1P00488 732 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 SOD2P04179 222 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 MCF2P10911 925 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 OR1G1P47890 313 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 SMTNP53814 917 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 TUSC3Q13454 348 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 SYCE2Q6PIF2 218 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 ZPBP2Q6X784 338 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 TAS1R1Q7RTX1 841 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 SLC22A17Q8WUG5 538 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 SUSD6Q92537 303 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 ZBTB45Q96K62 511 aaPredicted RBP22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 PPP1R10Q96QC0 940 aaKnown RBP22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 HERC2P3Q9BVR0 1158 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 CHST7Q9NS84 486 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 TFIP11Q9UBB9 837 aaKnown RBP22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 PRKAG3Q9UGI9 489 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 HCFC2Q9Y5Z7 792 aa22.54■■□□□ 1.2
SMNDC1-201ENST00000369592 GPR37L1O60883 481 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 TOM1L1O75674 476 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 YEATS4O95619 227 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 SCP2P22307 547 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 DHX8Q14562 1220 aaKnown RBP22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 CLUL1Q15846 466 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 TMEM132AQ24JP5 1023 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 KIAA0319Q5VV43 1072 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 ANKRD54Q6NXT1 300 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 MPZL3Q6UWV2 235 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 HAUS6Q7Z4H7 955 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 ZNF396Q96N95 335 aaPredicted RBP22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 RPS6KC1Q96S38 1066 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 PAAF1Q9BRP4 392 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 COLEC11Q9BWP8 271 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 HAPLN2Q9GZV7 340 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 PARVGQ9HBI0 331 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 CCDC39Q9UFE4 941 aa22.53■■□□□ 1.2
SMNDC1-201ENST00000369592 H0YCG3 227 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 SPTLC2O15270 562 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 PIGRP01833 764 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 THP07101 528 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 ZP2Q05996 745 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 BMS1Q14692 1282 aaKnown RBP22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 ZNF568Q3ZCX4 644 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 APBB1IPQ7Z5R6 666 aaPredicted RBP22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 GPR65Q8IYL9 337 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 DNAJC19Q96DA6 116 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 GPR62Q9BZJ7 368 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 ST6GALNAC4Q9H4F1 302 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 CACNG4Q9UBN1 327 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 FAM50BQ9Y247 325 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 GDAQ9Y2T3 454 aa22.52■■□□□ 1.2
SMNDC1-201ENST00000369592 VWA8A3KMH1 1905 aa22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 MYMKA6NI61 221 aa22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 MCL1Q07820 350 aa22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 STK38Q15208 465 aa22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 AXDND1Q5T1B0 1012 aaPredicted RBP22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 RRAGBQ5VZM2 374 aa22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 KLHL5Q96PQ7 755 aa22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 RXFP1Q9HBX9 757 aa22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 ADAM28Q9UKQ2 775 aa22.51■■□□□ 1.19
SMNDC1-201ENST00000369592 TRAK2O60296 914 aa22.5■■□□□ 1.19
SMNDC1-201ENST00000369592 NR1I2O75469 434 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms