RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 RRAGAQ7L523 313 aa12.03□□□□□ -0.48
VANGL1-203ENST00000369509 CACNA2D4Q7Z3S7 1137 aa12.03□□□□□ -0.48
VANGL1-203ENST00000369509 SYN2Q92777 582 aaPredicted RBP12.03□□□□□ -0.48
VANGL1-203ENST00000369509 MSTO1Q9BUK6 570 aa12.03□□□□□ -0.48
VANGL1-203ENST00000369509 TUBB2BQ9BVA1 445 aa12.03□□□□□ -0.48
VANGL1-203ENST00000369509 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
VANGL1-203ENST00000369509 TOPORSQ9NS56 1045 aaPredicted RBP12.03□□□□□ -0.48
VANGL1-203ENST00000369509 PRMT7Q9NVM4 692 aaPredicted RBP12.03□□□□□ -0.48
VANGL1-203ENST00000369509 SAGE1Q9NXZ1 904 aa12.03□□□□□ -0.48
VANGL1-203ENST00000369509 MRFAP1Q9Y605 127 aa12.03□□□□□ -0.48
VANGL1-203ENST00000369509 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
VANGL1-203ENST00000369509 TRIP11Q15643 1979 aa12.03□□□□□ -0.48
VANGL1-203ENST00000369509 CLDN3O15551 220 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 KPNA6O60684 536 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 LDHAP00338 332 aaKnown RBP12.02□□□□□ -0.48
VANGL1-203ENST00000369509 RARBP10826 455 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 HOXD10P28358 340 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 ACOT2P49753 483 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 MXI1P50539 228 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 JAM2P57087 298 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 HGSNATQ68CP4 663 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 RUFY4Q6ZNE9 571 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 C15orf39Q6ZRI6 1047 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 ZNF410Q86VK4 478 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 CCDC127Q96BQ5 260 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 WDR24Q96S15 920 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 PPP1R16BQ96T49 567 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 POP1Q99575 1024 aaKnown RBP12.02□□□□□ -0.48
VANGL1-203ENST00000369509 INTS2Q9H0H0 1204 aaKnown RBP12.02□□□□□ -0.48
VANGL1-203ENST00000369509 ADAMTS10Q9H324 1103 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 ARHGAP20Q9P2F6 1191 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 COQ4Q9Y3A0 265 aa12.02□□□□□ -0.48
VANGL1-203ENST00000369509 PDCD11Q14690 1871 aaKnown RBP12.02□□□□□ -0.49
VANGL1-203ENST00000369509 PTPRJQ12913 1337 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 ZEB2O60315 1214 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 LRRN2O75325 713 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 GPR32O75388 356 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 ZSCAN20P17040 1043 aaPredicted RBP12.02□□□□□ -0.49
VANGL1-203ENST00000369509 GTF2H1P32780 548 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 CHMP4BP1P59074 171 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 PRPF4BQ13523 1007 aaKnown RBP12.02□□□□□ -0.49
VANGL1-203ENST00000369509 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
VANGL1-203ENST00000369509 GNASQ5JWF2 1037 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 ATF7IP2Q5U623 682 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 EEF1DP3Q658K8 133 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 IQCEQ6IPM2 695 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 CCSAPQ6IQ19 270 aaPredicted RBP12.02□□□□□ -0.49
VANGL1-203ENST00000369509 GJB7Q6PEY0 223 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 MPZL3Q6UWV2 235 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 LRRN4CLQ8ND94 238 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 KLHDC9Q8NEP7 349 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 PXYLP1Q8TE99 480 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 MTG1Q9BT17 334 aaPredicted RBP12.02□□□□□ -0.49
VANGL1-203ENST00000369509 NUCKS1Q9H1E3 243 aaKnown RBP12.02□□□□□ -0.49
VANGL1-203ENST00000369509 TMEM8AQ9HCN3 771 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 HDAC6Q9UBN7 1215 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 MYO6Q9UM54 1294 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.49
VANGL1-203ENST00000369509 OGTO15294 1046 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 TREHO43280 583 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 CSDE1O75534 798 aaKnown RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 PLEKP08567 350 aaPredicted RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 CYP2C9P11712 490 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 CST5P28325 142 aaPredicted RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 TNFSF9P41273 254 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 TUBB4BP68371 445 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 ZNF200P98182 395 aaPredicted RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 KRT39Q6A163 491 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 USP37Q86T82 979 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 BRSK2Q8IWQ3 736 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 GPR161Q8N6U8 529 aaKnown RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 EHBP1Q8NDI1 1231 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 ZNF296Q8WUU4 475 aaPredicted RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 NLRP7Q8WX94 980 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 GOLGA1Q92805 767 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 LZTFL1Q9NQ48 299 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 XPNPEP3Q9NQH7 507 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 ZNHIT6Q9NWK9 470 aaKnown RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 RBAKQ9NYW8 714 aaPredicted RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 AIPL1Q9NZN9 384 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 APEX2Q9UBZ4 518 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 REXO2Q9Y3B8 237 aaKnown RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 FKTNO75072 461 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 NDUFA10O95299 355 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 DLATP10515 647 aaKnown RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 CLCN6P51797 869 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 SEZ6Q53EL9 994 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 PHLDB3Q6NSJ2 640 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 CXCL17Q6UXB2 119 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 SRGAP1Q7Z6B7 1085 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 ZBTB33Q86T24 672 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 CEP112Q8N8E3 955 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 ACRBPQ8NEB7 543 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 SEMA4DQ92854 862 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 FAM84AQ96KN4 292 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 GPR88Q9GZN0 384 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 FAM49AQ9H0Q0 323 aaPredicted RBP12.01□□□□□ -0.49
VANGL1-203ENST00000369509 CDT1Q9H211 546 aa12.01□□□□□ -0.49
VANGL1-203ENST00000369509 PDZD7Q9H5P4 517 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms