RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CAPN15O75808 1086 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 DEXIO95424 95 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 ITGA6P23229 1130 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 INPP1P49441 399 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 YWHAGP61981 247 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRDM1-201ENST00000369089 NCAPHQ15003 741 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 ARHGAP44Q17R89 818 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 CLVS1Q8IUQ0 354 aaPredicted RBP11.02□□□□□ -0.65
PRDM1-201ENST00000369089 SPATA5Q8NB90 893 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 ESR2Q92731 530 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 SDCCAG3Q96C92 435 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 SLC10A4Q96EP9 437 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 XAGE2Q96GT9 111 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 BTBD10Q9BSF8 475 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 TBC1D10AQ9BXI6 508 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 RNPEPQ9H4A4 650 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 CNNM2Q9H8M5 875 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 SENP1Q9P0U3 644 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 SMG5Q9UPR3 1016 aaKnown RBP11.02□□□□□ -0.65
PRDM1-201ENST00000369089 BOLA2-SMG1P6H3BVE0 249 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
PRDM1-201ENST00000369089 MT-ND3P03897 115 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 PDK3Q15120 406 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 SH3D19Q5HYK7 790 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 APOA5Q6Q788 366 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 ITPKCQ96DU7 683 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 WWP1Q9H0M0 922 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 SPHKAPQ2M3C7 1700 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 H3BRJ5 948 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 DDX42Q86XP3 938 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRDM1-201ENST00000369089 ACMSDQ8TDX5 336 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 JDP2Q8WYK2 163 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 PLIN2Q99541 437 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 ING2Q9H160 280 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 UPF3AQ9H1J1 476 aaKnown RBP11.02□□□□□ -0.65
PRDM1-201ENST00000369089 PABPC3Q9H361 631 aaKnown RBP11.02□□□□□ -0.65
PRDM1-201ENST00000369089 STX18Q9P2W9 335 aaKnown RBP11.02□□□□□ -0.65
PRDM1-201ENST00000369089 STK17AQ9UEE5 414 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 APPL1Q9UKG1 709 aa11.02□□□□□ -0.65
PRDM1-201ENST00000369089 ABCA9Q8IUA7 1624 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 BCL10O95999 233 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 GLI1P08151 1106 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 TBX2Q13207 712 aaPredicted RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 TAF1BQ53T94 588 aaPredicted RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 TWF2Q6IBS0 349 aaKnown RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 NEK5Q6P3R8 708 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 POTEAQ6S8J7 498 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 PRR23CQ6ZRP0 262 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 NYXQ9GZU5 481 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 CFLARO15519 480 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 GSNP06396 782 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 SCRN3Q0VDG4 424 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 DHX34Q14147 1143 aaKnown RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 TTC38Q5R3I4 469 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 PPP1R2P3Q6NXS1 205 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 TRMT10CQ7L0Y3 403 aaKnown RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 NUP93Q8N1F7 819 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 ZNF713Q8N859 430 aaPredicted RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 PYROXD1Q8WU10 500 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 RASSF5Q8WWW0 418 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 CEP295NLQ96MC4 621 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 KCNK16Q96T55 309 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 PARVGQ9HBI0 331 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 CYP4F11Q9HBI6 524 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 PKD2L2Q9NZM6 624 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 HERC5Q9UII4 1024 aaKnown RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 EVPLLA8MZ36 301 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 M0R3G1 203 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 SRGAP2CP0DJJ0 459 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 SRGAP2BP0DMP2 458 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 ATF4P18848 351 aaPredicted RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 RAB14P61106 215 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 ERVK-24P63145 666 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 OTUD4Q01804 1114 aaKnown RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 OCRLQ01968 901 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 DNAJC1Q96KC8 554 aaKnown RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 OSBPL6Q9BZF3 934 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 SAR1AQ9NR31 198 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 LIMA1Q9UHB6 759 aaKnown RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 PHTF1Q9UMS5 762 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 SLC12A4Q9UP95 1085 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 CDK12Q9NYV4 1490 aaPredicted RBP11.01□□□□□ -0.65
PRDM1-201ENST00000369089 ABCC12Q96J65 1359 aa11.01□□□□□ -0.65
PRDM1-201ENST00000369089 H0Y626 953 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 CDH16O75309 829 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 KRT36O76013 467 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 FAM153BP0C7A2 387 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 ABCB4P21439 1286 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 PRAMEP78395 509 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 ACAP1Q15027 740 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 SMU1Q2TAY7 513 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 FAM153CQ494X1 144 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 C6orf89Q6UWU4 347 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 TTC8Q8TAM2 541 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 JADE3Q92613 823 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 TUBGCP3Q96CW5 907 aa11□□□□□ -0.65
PRDM1-201ENST00000369089 MYLK2Q9H1R3 596 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms