RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 NEFHP12036 1026 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 BRAFP15056 766 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 ATP4AP20648 1035 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 ATP6V1C1P21283 382 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 STX2P32856 288 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 PEX19P40855 299 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 CRKP46108 304 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 YARSP54577 528 aaKnown RBP18.64■□□□□ 0.57
CHTOP-203ENST00000368690 GPC5P78333 572 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 CAV1Q03135 178 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 AADACL2Q6P093 401 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 NLGN2Q8NFZ4 835 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 CYP39A1Q9NYL5 469 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 CTTNBP2NLQ9P2B4 639 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 MAGEB2O15479 319 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 TBCAO75347 108 aaKnown RBP18.64■□□□□ 0.57
CHTOP-203ENST00000368690 SNUPNO95149 360 aaKnown RBP18.64■□□□□ 0.57
CHTOP-203ENST00000368690 GCNT3O95395 438 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 NPTXRO95502 500 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 PECAM1P16284 738 aaPredicted RBP18.64■□□□□ 0.57
CHTOP-203ENST00000368690 RHBDL3P58872 404 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 PABPC4Q13310 644 aaKnown RBP eCLIP18.64■□□□□ 0.574e-7■■□□□ 12.7
CHTOP-203ENST00000368690 SETDB1Q15047 1291 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 WASHC2DQ5SRD0 308 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 GPATCH4Q5T3I0 446 aaKnown RBP18.64■□□□□ 0.57
CHTOP-203ENST00000368690 NIM1KQ8IY84 436 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 ETNPPLQ8TBG4 499 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 PIGOQ8TEQ8 1089 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 KCNK9Q9NPC2 374 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 NKIRAS1Q9NYS0 192 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 TRIM33Q9UPN9 1127 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 STARD13Q9Y3M8 1113 aa18.64■□□□□ 0.57
CHTOP-203ENST00000368690 ADAMTSL1Q8N6G6 1762 aa18.63■□□□□ 0.57
CHTOP-203ENST00000368690 FOCADQ5VW36 1801 aa18.63■□□□□ 0.57
CHTOP-203ENST00000368690 DDX23Q9BUQ8 820 aaKnown RBP18.63■□□□□ 0.57
CHTOP-203ENST00000368690 CLIC2O15247 247 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 TP73O15350 636 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 PEX11AO75192 247 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 CREB1P16220 341 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 TAC1P20366 129 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 COMTP21964 271 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 MAN1A1P33908 653 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 STAT3P40763 770 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 POLGP54098 1239 aaPredicted RBP18.62■□□□□ 0.57
CHTOP-203ENST00000368690 PSMC6P62333 389 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 INTS8Q75QN2 995 aaKnown RBP18.62■□□□□ 0.57
CHTOP-203ENST00000368690 OTUD6AQ7L8S5 288 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 ANKRD42Q8N9B4 389 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 SPDYE1Q8NFV5 336 aaPredicted RBP18.62■□□□□ 0.57
CHTOP-203ENST00000368690 SPON1Q9HCB6 807 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 GPCPD1Q9NPB8 672 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 PCDHAC2Q9Y5I4 1007 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 ZMYM2Q9UBW7 1377 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 FTLP02792 175 aaPredicted RBP18.62■□□□□ 0.57
CHTOP-203ENST00000368690 TPBGLP0DKB5 382 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 PYGMP11217 842 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 ACADSP16219 412 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 MARCKSL1P49006 195 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 IL9RQ01113 521 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 AP3B2Q13367 1082 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 BIRC2Q13490 618 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 MPP2Q14168 576 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 Q4G0T1 1027 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 ANO7Q6IWH7 933 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 HHIPL2Q6UWX4 724 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 RGS9BPQ6ZS82 235 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 APBB1IPQ7Z5R6 666 aaPredicted RBP18.62■□□□□ 0.57
CHTOP-203ENST00000368690 CCDC25Q86WR0 208 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 PALB2Q86YC2 1186 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 MFN1Q8IWA4 741 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.62■□□□□ 0.57
CHTOP-203ENST00000368690 CRYGNQ8WXF5 182 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 ARHGEF10LQ9HCE6 1279 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 DMAC2Q9NW81 257 aa18.62■□□□□ 0.57
CHTOP-203ENST00000368690 TRAFD1O14545 582 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-203ENST00000368690 CDH16O75309 829 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 ACSL3O95573 720 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 BCRP11274 1271 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 CDC25CP30307 473 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 RASSF2P50749 326 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 SLC30A9Q6PML9 568 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 RELL1Q8IUW5 271 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 RIBC1Q8N443 379 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-203ENST00000368690 ANO3Q9BYT9 981 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 PITPNM3Q9BZ71 974 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 YIPF3Q9GZM5 350 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 SEPT11Q9NVA2 429 aaKnown RBP18.61■□□□□ 0.57
CHTOP-203ENST00000368690 ETAA1Q9NY74 926 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 USH1CQ9Y6N9 552 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 LRRD1A4D1F6 860 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 LMNAP02545 664 aaKnown RBP18.61■□□□□ 0.57
CHTOP-203ENST00000368690 CTCFP49711 727 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-203ENST00000368690 FKBP1AP62942 108 aaKnown RBP18.61■□□□□ 0.57
CHTOP-203ENST00000368690 MYL7Q01449 175 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 GDAP1Q8TB36 358 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 JDP2Q8WYK2 163 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 SNF8Q96H20 258 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 FAM20AQ96MK3 541 aa18.61■□□□□ 0.57
CHTOP-203ENST00000368690 POLR3CQ9BUI4 534 aaPredicted RBP18.61■□□□□ 0.57
CHTOP-203ENST00000368690 PLVAPQ9BX97 442 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms