RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 RFX6Q8HWS3 928 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 SLC25A41Q8N5S1 370 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 RFFLQ8WZ73 363 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 TMEM39BQ9GZU3 492 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 ELP3Q9H9T3 547 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 POLLQ9UGP5 575 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
EBF3-202ENST00000368648 SSU72P8A0A1W2PR75 194 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 A8MUI8 341 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 B2RBV5 119 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 H3BRJ5 948 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 CBX6O95503 412 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 SARSP49591 514 aaKnown RBP11.47□□□□□ -0.57
EBF3-202ENST00000368648 USP11P51784 963 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 LMBRD2Q68DH5 695 aaPredicted RBP11.47□□□□□ -0.57
EBF3-202ENST00000368648 CDC42EP5Q6NZY7 148 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 FAM160B2Q86V87 743 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 APOL6Q9BWW8 343 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 Q9H521 79 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 DCDC2CA8MYV0 355 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 MARK3P27448 753 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 CHRNA3P32297 505 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 PLCB4Q15147 1175 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 AGBL2Q5U5Z8 902 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 RSBN1LQ6PCB5 846 aaPredicted RBP11.47□□□□□ -0.57
EBF3-202ENST00000368648 B4GALNT2Q8NHY0 566 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 SEMA6BQ9H3T3 888 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 NAGPAQ9UK23 515 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 TACC3Q9Y6A5 838 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 PNMA6FA0A0J9YX94 578 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 WNT7AO00755 349 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 CYP26A1O43174 497 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 C12orf60Q5U649 245 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 LRIG3Q6UXM1 1119 aa11.47□□□□□ -0.57
EBF3-202ENST00000368648 FAM43BQ6ZT52 329 aaPredicted RBP11.47□□□□□ -0.57
EBF3-202ENST00000368648 RBM15Q96T37 977 aaKnown RBP eCLIP11.47□□□□□ -0.57
EBF3-202ENST00000368648 PABPC3Q9H361 631 aaKnown RBP11.47□□□□□ -0.57
EBF3-202ENST00000368648 FOXO6A8MYZ6 492 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 AGPSO00116 658 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 RNF8O76064 485 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 SEC24DO94855 1032 aaPredicted RBP11.46□□□□□ -0.57
EBF3-202ENST00000368648 HSPA6P17066 643 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 MFAP3P55082 362 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 TRIP10Q15642 601 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 KNOP1Q1ED39 458 aaKnown RBP11.46□□□□□ -0.57
EBF3-202ENST00000368648 AADACL2Q6P093 401 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 RHOT2Q8IXI1 618 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 GALNT4Q8N4A0 578 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 GLIS3Q8NEA6 775 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 LRGUKQ96M69 825 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 ANO3Q9BYT9 981 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 PARVGQ9HBI0 331 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 PCSK1NQ9UHG2 260 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 GOLGA4Q13439 2230 aaKnown RBP11.46□□□□□ -0.57
EBF3-202ENST00000368648 FLT1P17948 1338 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 PVALEFA0A1B0GWK0 134 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 INO80B-WBP1J3KQ70 363 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 DNM1LO00429 736 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 ORC4O43929 436 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 COMTP21964 271 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 LIG4P49917 911 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 IL1RL1Q01638 556 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 ASPHQ12797 758 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 CDO1Q16878 200 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 ZC2HC1CQ53FD0 456 aaPredicted RBP11.46□□□□□ -0.57
EBF3-202ENST00000368648 CENPUQ71F23 418 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 FBXO33Q7Z6M2 555 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 PDIK1LQ8N165 341 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 ERGIC2Q96RQ1 377 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 RMDN3Q96TC7 470 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 INO80BQ9C086 356 aaPredicted RBP11.46□□□□□ -0.57
EBF3-202ENST00000368648 HSD3B7Q9H2F3 369 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 TRAF3IP3Q9Y228 551 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 ITSN1Q15811 1721 aa11.46□□□□□ -0.57
EBF3-202ENST00000368648 TTC36A6NLP5 189 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 COPEO14579 308 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 EPHB2P29323 1055 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 OSTNP61366 133 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 KRT81Q14533 505 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 SLC30A10Q6XR72 485 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 SCARA5Q6ZMJ2 495 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 NLRP7Q8WX94 980 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 ATXN7L3BQ96GX2 97 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 FAM129AQ9BZQ8 928 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 AP5M1Q9H0R1 490 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 THAP2Q9H0W7 228 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 PFDN4Q9NQP4 134 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 RNF146Q9NTX7 359 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 FAM217BQ9NTX9 383 aaPredicted RBP11.46□□□□□ -0.58
EBF3-202ENST00000368648 BCL9O00512 1426 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 MAP2P11137 1827 aaKnown RBP11.46□□□□□ -0.58
EBF3-202ENST00000368648 WDR64B1ANS9 1081 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 TRAPPC3O43617 180 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 GRIN3BO60391 1043 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 APOEP02649 317 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 MRPS35P82673 323 aaKnown RBP11.46□□□□□ -0.58
EBF3-202ENST00000368648 ARHGAP4P98171 946 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 MDM2Q00987 491 aaPredicted RBP11.46□□□□□ -0.58
EBF3-202ENST00000368648 AMPD2Q01433 879 aa11.46□□□□□ -0.58
EBF3-202ENST00000368648 STYK1Q6J9G0 422 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms