RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PBX2P40425 430 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 MLH1P40692 756 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 GRM5P41594 1212 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 AFF1P51825 1210 aaKnown RBP15.16■□□□□ 0.02
TPM3-211ENST00000368531 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 GLB1LQ6UWU2 654 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 ADSSL1Q8N142 457 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 RDH13Q8NBN7 331 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 CXCL16Q9H2A7 254 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 SEMA6BQ9H3T3 888 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 CTNND2Q9UQB3 1225 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 STYXL1Q9Y6J8 313 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 ANK1P16157 1881 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 LCHNA4D1U4 455 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 TRIM49BA6NDI0 452 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 PDXKO00764 312 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 PSMA7O14818 248 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 HOXA2O43364 376 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 CALUO43852 315 aaPredicted RBP15.15■□□□□ 0.02
TPM3-211ENST00000368531 OFD1O75665 1012 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 POMCP01189 267 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 GARTP22102 1010 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
TPM3-211ENST00000368531 STX17P56962 302 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 NLRP12P59046 1061 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 BTG3Q14201 252 aaPredicted RBP15.15■□□□□ 0.02
TPM3-211ENST00000368531 DPCR1Q3MIW9 517 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 RBM43Q6ZSC3 357 aaKnown RBP15.15■□□□□ 0.02
TPM3-211ENST00000368531 NELFBQ8WX92 580 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 ZFP42Q96MM3 310 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 CASD1Q96PB1 797 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 RPS6KC1Q96S38 1066 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 RAD9AQ99638 391 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 TMEM117Q9H0C3 514 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 RPF1Q9H9Y2 349 aaKnown RBP15.15■□□□□ 0.02
TPM3-211ENST00000368531 MIOSQ9NXC5 875 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 HSPBP1Q9NZL4 362 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 HCSTQ9UBK5 93 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 INSL6Q9Y581 213 aa15.15■□□□□ 0.02
TPM3-211ENST00000368531 ARL5CA6NH57 179 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 NR3C1P04150 777 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 CLTAP09496 248 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 CXCL8P10145 99 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 PMS1P54277 932 aaKnown RBP15.14■□□□□ 0.01
TPM3-211ENST00000368531 SPAG1Q07617 926 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 COBLL1Q53SF7 1204 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 NOMO2Q5JPE7 1267 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 GLRA4Q5JXX5 417 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 CEP135Q66GS9 1140 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 ANKRD40Q6AI12 368 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 GPD1LQ8N335 351 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 GOLGA5Q8TBA6 731 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 URGCPQ8TCY9 931 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 P2RX5Q93086 422 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 EEF2KMTQ96G04 330 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 DHTKD1Q96HY7 919 aaPredicted RBP15.14■□□□□ 0.01
TPM3-211ENST00000368531 TSG101Q99816 390 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 PBX4Q9BYU1 374 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 NKX2-4Q9H2Z4 354 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 UBN1Q9NPG3 1134 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
TPM3-211ENST00000368531 MSRAQ9UJ68 235 aa15.14■□□□□ 0.01
TPM3-211ENST00000368531 CPSF3Q9UKF6 684 aaKnown RBP15.14■□□□□ 0.01
TPM3-211ENST00000368531 YBX2Q9Y2T7 364 aaKnown RBP15.14■□□□□ 0.01
TPM3-211ENST00000368531 COL4A6Q14031 1691 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 KIAA1671Q9BY89 1806 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 A0A1W2PPC1 479 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 EXTL3O43909 919 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 FAM189A1O60320 539 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 EXOC3O60645 756 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 LDHAP00338 332 aaKnown RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 CCNE1P24864 410 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 PPP1R2P41236 205 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 SCNN1GP51170 649 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 SNRPFP62306 86 aaKnown RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 HTRA4P83105 476 aaPredicted RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 RNASELQ05823 741 aaKnown RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 PDCD11Q14690 1871 aaKnown RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 ENOX2Q16206 610 aaKnown RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 KYAT1Q16773 422 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 RALGAPA2Q2PPJ7 1873 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 SLC10A6Q3KNW5 377 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 SPOUT1Q5T280 376 aaKnown RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 CENPPQ6IPU0 288 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 CRELD2Q6UXH1 353 aaPredicted RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 NLRC5Q86WI3 1866 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 CBWD2Q8IUF1 395 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 MLKLQ8NB16 471 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 XXYLT1Q8NBI6 393 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 ZNF689Q96CS4 500 aaPredicted RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
TPM3-211ENST00000368531 TRAF3IP3Q9Y228 551 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 PCDHA11Q9Y5I1 949 aa15.13■□□□□ 0.01
TPM3-211ENST00000368531 SYCE3A1L190 88 aa15.12■□□□□ 0.01
TPM3-211ENST00000368531 LACTBL1A8MY62 500 aa15.12■□□□□ 0.01
TPM3-211ENST00000368531 MEFVO15553 781 aaPredicted RBP15.12■□□□□ 0.01
TPM3-211ENST00000368531 CA3P07451 260 aa15.12■□□□□ 0.01
TPM3-211ENST00000368531 NR2F2P24468 414 aa15.12■□□□□ 0.01
TPM3-211ENST00000368531 CASP4P49662 377 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms