RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 EXOC4Q96A65 974 aa18.83■□□□□ 0.61
LMNA-205ENST00000368299 R3HDMLQ9H3Y0 253 aa18.83■□□□□ 0.61
LMNA-205ENST00000368299 VIPAS39Q9H9C1 493 aa18.83■□□□□ 0.61
LMNA-205ENST00000368299 PSD3Q9NYI0 1048 aa18.83■□□□□ 0.61
LMNA-205ENST00000368299 STIM2Q9P246 746 aa18.83■□□□□ 0.61
LMNA-205ENST00000368299 NOCTQ9UK39 431 aaKnown RBP18.83■□□□□ 0.61
LMNA-205ENST00000368299 AMFRQ9UKV5 643 aa18.83■□□□□ 0.61
LMNA-205ENST00000368299 ASB14A6NK59 587 aa18.83■□□□□ 0.6
LMNA-205ENST00000368299 TULP1O00294 542 aaPredicted RBP18.83■□□□□ 0.6
LMNA-205ENST00000368299 ARIH2O95376 493 aa18.83■□□□□ 0.6
LMNA-205ENST00000368299 SLC10A4Q96EP9 437 aa18.83■□□□□ 0.6
LMNA-205ENST00000368299 JPH2Q9BR39 696 aaPredicted RBP18.83■□□□□ 0.6
LMNA-205ENST00000368299 THAP2Q9H0W7 228 aa18.83■□□□□ 0.6
LMNA-205ENST00000368299 TAS2R14Q9NYV8 317 aa18.83■□□□□ 0.6
LMNA-205ENST00000368299 SIP14410 1827 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 SGPL1O95470 568 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 FTLP02792 175 aaPredicted RBP18.82■□□□□ 0.6
LMNA-205ENST00000368299 PDE6CP51160 858 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 CAPSQ13938 189 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 MXD4Q14582 209 aaPredicted RBP18.82■□□□□ 0.6
LMNA-205ENST00000368299 WDR78Q5VTH9 848 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 ZPBP2Q6X784 338 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 PALB2Q86YC2 1186 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 DHX37Q8IY37 1157 aaKnown RBP18.82■□□□□ 0.6
LMNA-205ENST00000368299 ATP8B4Q8TF62 1192 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 HES6Q96HZ4 224 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 OSGEPQ9NPF4 335 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 C1orf112Q9NSG2 853 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 ADAM21Q9UKJ8 722 aa18.82■□□□□ 0.6
LMNA-205ENST00000368299 DIS3Q9Y2L1 958 aaKnown RBP18.82■□□□□ 0.6
LMNA-205ENST00000368299 A0A0B4J269 797 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 CYP26A1O43174 497 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 BUB1BO60566 1050 aaPredicted RBP18.81■□□□□ 0.6
LMNA-205ENST00000368299 TNNI1P19237 187 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 TNFRSF8P28908 595 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 NLRP11P59045 1033 aaKnown RBP18.81■□□□□ 0.6
LMNA-205ENST00000368299 TNNC1P63316 161 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 GPC5P78333 572 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 ZACNQ401N2 412 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 WDR44Q5JSH3 913 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 CCDC62Q6P9F0 684 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 NOP9Q86U38 636 aaKnown RBP18.81■□□□□ 0.6
LMNA-205ENST00000368299 MSTO1Q9BUK6 570 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 GOLPH3Q9H4A6 298 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 PDE11AQ9HCR9 933 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 SCN4AP35499 1836 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 CYP11B1P15538 503 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 HNRNPH2P55795 449 aaKnown RBP18.81■□□□□ 0.6
LMNA-205ENST00000368299 CCNA1P78396 465 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 TTLL4Q14679 1199 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 HSDL1Q3SXM5 330 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 SPATA33Q96N06 139 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 TARS2Q9BW92 718 aaKnown RBP18.81■□□□□ 0.6
LMNA-205ENST00000368299 SUGCTQ9HAC7 445 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 RBAKQ9NYW8 714 aaPredicted RBP18.81■□□□□ 0.6
LMNA-205ENST00000368299 DMGDHQ9UI17 866 aaKnown RBP18.81■□□□□ 0.6
LMNA-205ENST00000368299 TMEM59LQ9UK28 342 aa18.81■□□□□ 0.6
LMNA-205ENST00000368299 PGRMC1O00264 195 aaKnown RBP18.8■□□□□ 0.6
LMNA-205ENST00000368299 ZBTB48P10074 688 aaPredicted RBP18.8■□□□□ 0.6
LMNA-205ENST00000368299 GJA5P36382 358 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 CDR2Q01850 454 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 SLC47A2Q86VL8 602 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 METTL13Q8N6R0 699 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 PRPF31Q8WWY3 499 aaKnown RBP18.8■□□□□ 0.6
LMNA-205ENST00000368299 ARHGEF26Q96DR7 871 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 ADGRA2Q96PE1 1338 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 IGKV6-21A0A0C4DH24 114 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 A0A0U1RQG5 324 aaPredicted RBP18.8■□□□□ 0.6
LMNA-205ENST00000368299 CEP104O60308 925 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 ZMYND10O75800 440 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 CHRNB2P17787 502 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 ACOT2P49753 483 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 CRELD2Q6UXH1 353 aaPredicted RBP18.8■□□□□ 0.6
LMNA-205ENST00000368299 FBXO16Q8IX29 292 aaPredicted RBP18.8■□□□□ 0.6
LMNA-205ENST00000368299 RASGEF1CQ8N431 466 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 ZNF516Q92618 1163 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.8■□□□□ 0.65e-7■■□□□ 13.2
LMNA-205ENST00000368299 SMARCAD1Q9H4L7 1026 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 ANKFY1Q9P2R3 1169 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 SLC45A1Q9Y2W3 748 aa18.8■□□□□ 0.6
LMNA-205ENST00000368299 C4BPAP04003 597 aaKnown RBP18.79■□□□□ 0.6
LMNA-205ENST00000368299 TXNP10599 105 aaKnown RBP18.79■□□□□ 0.6
LMNA-205ENST00000368299 CDCA2Q69YH5 1023 aaPredicted RBP18.79■□□□□ 0.6
LMNA-205ENST00000368299 ZBTB8OSQ8IWT0 167 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 GPRC5AQ8NFJ5 357 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 SCFD2Q8WU76 684 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 HDAC7Q8WUI4 952 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 TATDN2Q93075 761 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 MRPL4Q9BYD3 311 aaKnown RBP18.79■□□□□ 0.6
LMNA-205ENST00000368299 C2orf40Q9H1Z8 148 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.79■□□□□ 0.62e-7■■■■■ 58.1
LMNA-205ENST00000368299 CLDN3O15551 220 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 FMO1Q01740 532 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 CLUL1Q15846 466 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 C11orf63Q6NUN7 778 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 IFT20Q8IY31 132 aa18.79■□□□□ 0.6
LMNA-205ENST00000368299 AENQ8WTP8 325 aaKnown RBP18.79■□□□□ 0.6
LMNA-205ENST00000368299 DHX38Q92620 1227 aaKnown RBP18.79■□□□□ 0.6
LMNA-205ENST00000368299 ZBTB45Q96K62 511 aaPredicted RBP18.79■□□□□ 0.6
LMNA-205ENST00000368299 PCDHB18PQ96TA0 734 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms