RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 IPO11Q9UI26 975 aaKnown RBP13.09□□□□□ -0.31
PTPRK-203ENST00000368207 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.31
PTPRK-203ENST00000368207 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.31
PTPRK-203ENST00000368207 WEE2P0C1S8 567 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 KRT3P12035 628 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 CDH6P55285 790 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 BCAR1P56945 870 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 TSPY1Q01534 308 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 ADCY2Q08462 1091 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 GPS1Q13098 491 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 IDI2Q9BXS1 227 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 KLC2Q9H0B6 622 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.31
PTPRK-203ENST00000368207 TBX20Q9UMR3 447 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 FZD1Q9UP38 647 aa13.08□□□□□ -0.31
PTPRK-203ENST00000368207 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 PLSCR1O15162 318 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 RFC5P40937 340 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 ARL4CP56559 192 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 NOP14P78316 857 aaKnown RBP13.08□□□□□ -0.32
PTPRK-203ENST00000368207 NME3Q13232 169 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 CBWD2Q8IUF1 395 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 PDCD2LQ9BRP1 358 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 CBWD1Q9BRT8 395 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 ERAP1Q9NZ08 941 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 SART1O43290 800 aaKnown RBP13.08□□□□□ -0.32
PTPRK-203ENST00000368207 ERVK-24P63145 666 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 BZW1Q7L1Q6 419 aaKnown RBP13.08□□□□□ -0.32
PTPRK-203ENST00000368207 ZC3H18Q86VM9 953 aaKnown RBP13.08□□□□□ -0.32
PTPRK-203ENST00000368207 C18orf8Q96DM3 657 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 MLXIPLQ9NP71 852 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 STAP1Q9ULZ2 295 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 POLIQ9UNA4 740 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 PLAGL2Q9UPG8 496 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 MYBL1P10243 752 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 LCP1P13796 627 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 RCN2Q14257 317 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 SMAD1Q15797 465 aaKnown RBP13.08□□□□□ -0.32
PTPRK-203ENST00000368207 THOC1Q96FV9 657 aaKnown RBP13.08□□□□□ -0.32
PTPRK-203ENST00000368207 TMEM8AQ9HCN3 771 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 WDR70Q9NW82 654 aa13.08□□□□□ -0.32
PTPRK-203ENST00000368207 MAGEB2O15479 319 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 GRIN3BO60391 1043 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 PDGFRBP09619 1106 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 PMS1P54277 932 aaKnown RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 TMEM132DQ14C87 1099 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 SRRM1Q8IYB3 904 aaKnown RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 SIK2Q9H0K1 926 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 PRKAG2Q9UGJ0 569 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 TLK1Q9UKI8 766 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 A0A087X0T9 212 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 PFDN6O15212 129 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 MOCS2O96007 188 aaPredicted RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 FAM228BP0C875 321 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 CETPP11597 493 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 CYP2C9P11712 490 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 THOC5Q13769 683 aaKnown RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 IER5Q5VY09 327 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 NUGGCQ68CJ6 796 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 CENPPQ6IPU0 288 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 ERO1BQ86YB8 467 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 SCFD1Q8WVM8 642 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 CNOT10Q9H9A5 744 aaKnown RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 A0A1W2PQJ5 194 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 FAM86B1E9PN63 330 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 HBP1O60381 514 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 TOM1L1O75674 476 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 FAM86B2P0C5J1 330 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 RBP5P82980 135 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 SGSM1Q2NKQ1 1148 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 ZNF560Q96MR9 790 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 TMEM117Q9H0C3 514 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 ANKRD65E5RJM6 399 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 GPC4O75487 556 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 KRT14P02533 472 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 PMS2P54278 862 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 MAGOHP61326 146 aaKnown RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 C1orf228Q6PIY5 440 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 KCTD17Q8N5Z5 321 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 SLITRK6Q9H5Y7 841 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
PTPRK-203ENST00000368207 ADARB2Q9NS39 739 aaKnown RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.07□□□□□ -0.32
PTPRK-203ENST00000368207 NLRP11P59045 1033 aaKnown RBP13.06□□□□□ -0.32
PTPRK-203ENST00000368207 TRIM65Q6PJ69 517 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 DEPDC1BQ8WUY9 529 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 FAM198AQ9UFP1 575 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 FBXL5Q9UKA1 691 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 DUSP10Q9Y6W6 482 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 TXNDC9O14530 226 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 TTI1O43156 1089 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 GRAP2O75791 330 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 CLCN3P51790 818 aa13.06□□□□□ -0.32
PTPRK-203ENST00000368207 MYLK4Q86YV6 388 aaPredicted RBP13.06□□□□□ -0.32
PTPRK-203ENST00000368207 REXO1L1PQ8IX06 675 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms