RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CA12O43570 354 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 EXTL3O43909 919 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 PIGRP01833 764 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 LIG4P49917 911 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 GCNT1Q02742 428 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
USF1-202ENST00000368020 OLIG1Q8TAK6 271 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 BSNDQ8WZ55 320 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 DHX38Q92620 1227 aaKnown RBP15.11■□□□□ 0.01
USF1-202ENST00000368020 MS4A14Q96JA4 679 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 SH2D3AQ9BRG2 576 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 PORCNQ9H237 461 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 CARD9Q9H257 536 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 SLITRK6Q9H5Y7 841 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 DHX33Q9H6R0 707 aaKnown RBP15.11■□□□□ 0.01
USF1-202ENST00000368020 SUGCTQ9HAC7 445 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 ZFYVE28Q9HCC9 887 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 XPNPEP1Q9NQW7 623 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 NRBP2Q9NSY0 501 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 DMGDHQ9UI17 866 aaKnown RBP15.11■□□□□ 0.01
USF1-202ENST00000368020 STYXL1Q9Y6J8 313 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 SYNGAP1Q96PV0 1343 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 LRRC37A2A6NM11 1700 aa15.11■□□□□ 0.01
USF1-202ENST00000368020 GAS2O43903 313 aaKnown RBP15.1■□□□□ 0.01
USF1-202ENST00000368020 CEP104O60308 925 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 PDE6CP51160 858 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 GPC5P78333 572 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 CUL1Q13616 776 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 MTERF2Q49AM1 385 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 ALS2CLQ60I27 953 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 ARHGEF19Q8IW93 802 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 PPM1KQ8N3J5 372 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 WHAMMQ8TF30 809 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 SCFD2Q8WU76 684 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 RAB20Q9NX57 234 aa15.1■□□□□ 0.01
USF1-202ENST00000368020 GOLGA8IPA6NC78 632 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 GOLGA8JA6NMD2 632 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 H3BQF6 201 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 MTA2O94776 668 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 HEXIM1O94992 359 aaKnown RBP15.09■□□□□ 0.01
USF1-202ENST00000368020 HSPA6P17066 643 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 CLDN10P78369 228 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 MAP2K1Q02750 393 aaPredicted RBP15.09■□□□□ 0.01
USF1-202ENST00000368020 GRM1Q13255 1194 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 C17orf99Q6UX52 265 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 CYFIP1Q7L576 1253 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 TRMT1LQ7Z2T5 733 aaKnown RBP15.09■□□□□ 0.01
USF1-202ENST00000368020 NCAPG2Q86XI2 1143 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 METTL13Q8N6R0 699 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 CCDC26Q8TAB7 109 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 DEPTORQ8TB45 409 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 PLEKHO2Q8TD55 490 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 EPS8L1Q8TE68 723 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 AFAP1L1Q8TED9 768 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 SAAL1Q96ER3 474 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 CFHR5Q9BXR6 569 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 TMEM134Q9H6X4 195 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
USF1-202ENST00000368020 GOLGA6L10A0A0M3HER8 536 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 GOLGA6BA6NDN3 693 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 STRNO43815 780 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 OPA1O60313 960 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 BUB1BO60566 1050 aaPredicted RBP15.09■□□□□ 0.01
USF1-202ENST00000368020 PEX10O60683 326 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 AOC2O75106 756 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 CYP2C19P33261 490 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 DNA2P51530 1060 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 BPIFB4P59827 614 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 SP4Q02446 784 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 PSMD6Q15008 389 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 PPP1R2P3Q6NXS1 205 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 SLC39A4Q6P5W5 647 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 MAATS1Q7Z4T9 603 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 ZNF677Q86XU0 584 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 RPUSD2Q8IZ73 545 aaKnown RBP15.09■□□□□ 0.01
USF1-202ENST00000368020 ABRAQ8N0Z2 381 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 UBL4BQ8N7F7 174 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 FNBP1Q96RU3 617 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 RPS6KC1Q96S38 1066 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 KRT12Q99456 494 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 KIFC3Q9BVG8 833 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 C1orf112Q9NSG2 853 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 NOCTQ9UK39 431 aaKnown RBP15.09■□□□□ 0.01
USF1-202ENST00000368020 ADAM21Q9UKJ8 722 aa15.09■□□□□ 0.01
USF1-202ENST00000368020 NOC2LQ9Y3T9 749 aaKnown RBP15.09■□□□□ 0.01
USF1-202ENST00000368020 TULP1O00294 542 aaPredicted RBP15.08■□□□□ 0
USF1-202ENST00000368020 ZMYND10O75800 440 aa15.08■□□□□ 0
USF1-202ENST00000368020 FTLP02792 175 aaPredicted RBP15.08■□□□□ 0
USF1-202ENST00000368020 ABCB4P21439 1286 aa15.08■□□□□ 0
USF1-202ENST00000368020 UBA1P22314 1058 aaKnown RBP15.08■□□□□ 0
USF1-202ENST00000368020 MAPK4P31152 587 aa15.08■□□□□ 0
USF1-202ENST00000368020 VEGFBP49765 207 aa15.08■□□□□ 0
USF1-202ENST00000368020 WDR44Q5JSH3 913 aa15.08■□□□□ 0
USF1-202ENST00000368020 SEPT14Q6ZU15 432 aa15.08■□□□□ 0
USF1-202ENST00000368020 ADGRA3Q8IWK6 1321 aa15.08■□□□□ 0
USF1-202ENST00000368020 MREGQ8N565 214 aa15.08■□□□□ 0
USF1-202ENST00000368020 HDAC7Q8WUI4 952 aa15.08■□□□□ 0
USF1-202ENST00000368020 RUFY1Q96T51 708 aa15.08■□□□□ 0
USF1-202ENST00000368020 THAP2Q9H0W7 228 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms