RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 AKR1B1P15121 316 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 ATF4P18848 351 aaPredicted RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 HPS1Q92902 700 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 TMA16Q96EY4 203 aaKnown RBP11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 CITED4Q96RK1 184 aa11.67□□□□□ -0.54
CDC42BPA-205ENST00000366769 H0Y626 953 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 LIN7AO14910 233 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 PTK2Q05397 1052 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 MARK2Q7KZI7 788 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 UBASH3BQ8TF42 649 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 GLMNQ92990 594 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 SRPK1Q96SB4 655 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 E2F8A0AVK6 867 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 SNX2O60749 519 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 UBXN8O00124 270 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 AIM2O14862 343 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 PPIP5K2O43314 1243 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 ATP5JP18859 108 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 HMOX2P30519 316 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 NEDD8Q15843 81 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 MSL3Q8N5Y2 521 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 AP5M1Q9H0R1 490 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 GTSE1Q9NYZ3 720 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 IRF6O14896 467 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 RAD9BQ6WBX8 426 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCDC149Q6ZUS6 474 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 AIFM3Q96NN9 605 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 SUN2Q9UH99 717 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 ZNF839A8K0R7 811 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 OVGP1Q12889 678 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 LRRC41Q15345 812 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 PERM1Q5SV97 790 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 IRGCQ6NXR0 463 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 DHTKD1Q96HY7 919 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 GDAQ9Y2T3 454 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 INO80B-WBP1J3KQ70 363 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 ITGA6P23229 1130 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 ANXA13P27216 316 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 AARS2Q5JTZ9 985 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 MTDHQ86UE4 582 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 INO80BQ9C086 356 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 MYLK2Q9H1R3 596 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 IQANK1A0A1B0GTG1 560 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 CAPZA2P47755 286 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 ITGADQ13349 1161 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 DMC1Q14565 340 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 SCUBE1Q8IWY4 988 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 HSPH1Q92598 858 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 P2RX5Q93086 422 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 PSTPIP2Q9H939 334 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 HBS1LQ9Y450 684 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 LPIN1Q14693 890 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 SCARA5Q6ZMJ2 495 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 FMR1NBQ8N0W7 255 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 PAIP1Q9H074 479 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 AFF4Q9UHB7 1163 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 PCDHA12Q9UN75 941 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 MAST1Q9Y2H9 1570 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 IMPDH2P12268 514 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 GPS1Q13098 491 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 ZBED8Q8IZ13 594 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 LRRC47Q8N1G4 583 aaKnown RBP11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 STX19Q8N4C7 294 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 CHURC1Q8WUH1 139 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCDC28BQ9BUN5 200 aa11.66□□□□□ -0.54
CDC42BPA-205ENST00000366769 RAG1P15918 1043 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 ITGA7Q13683 1181 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 AP5Z1O43299 807 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 AKAP10O43572 662 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCDC130P13994 396 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 TTMPQ5BVD1 217 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 ACAD11Q709F0 780 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 OR8H2Q8N162 312 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 NUP85Q9BW27 656 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 SUPT3HB4E1H0 165 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 CEBPAP49715 358 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 TUBGCP3Q96CW5 907 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 SNF8Q96H20 258 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 ATP6V1HQ9UI12 483 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 GOLGA8TH3BQL2 631 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 RECQLP46063 649 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 PDIA2Q13087 525 aaKnown RBP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 DDI1Q8WTU0 396 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 RAD21L1Q9H4I0 556 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 ABCC1P33527 1531 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 IL2RBP14784 551 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCR3P51677 355 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 RNF135Q8IUD6 432 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 CHD2O14647 1828 aaKnown RBP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 TTC26A0AVF1 554 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 PRPF4O43172 522 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 KRT20P35900 424 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 BNIPLQ7Z465 357 aa11.65□□□□□ -0.54
CDC42BPA-205ENST00000366769 LUZP2Q86TE4 346 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms