RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 E2F4Q16254 413 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 DUSP6Q16828 381 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 SHC4Q6S5L8 630 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 MAP4K3Q8IVH8 894 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 VPS52Q8N1B4 723 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 MRPL43Q8N983 215 aaKnown RBP16.03■□□□□ 0.16
MRPL55-218ENST00000366747 BICD1Q96G01 975 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 FIZ1Q96SL8 496 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-218ENST00000366747 ZHX3Q9H4I2 956 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 CLDND1Q9NY35 253 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 TBX20Q9UMR3 447 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 PCDHA7Q9UN72 937 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 MYH15Q9Y2K3 1946 aa16.03■□□□□ 0.16
MRPL55-218ENST00000366747 EYSQ5T1H1 3165 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 MYMKA6NI61 221 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 NT5C1B-RDH14C9J2C7 533 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 PTGESO14684 152 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 HNRNPDLO14979 420 aaKnown RBP16.02■□□□□ 0.16
MRPL55-218ENST00000366747 B4GALT3O60512 393 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 KCNA5P22460 613 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 OR1G1P47890 313 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 LIG4P49917 911 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 ADAM15Q13444 863 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 XKR4Q5GH76 650 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 PLPP4Q5VZY2 271 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 RESP18Q5W5W9 173 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 CNNM4Q6P4Q7 775 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 ADGRD2Q7Z7M1 963 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 TMEM173Q86WV6 379 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-218ENST00000366747 DNAJC19Q96DA6 116 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 UROC1Q96N76 676 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 ACAP3Q96P50 834 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 TSPAN18Q96SJ8 248 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 SLC38A7Q9NVC3 462 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 KBTBD4Q9NVX7 518 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 MIOSQ9NXC5 875 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 ZDHHC9Q9Y397 364 aa16.02■□□□□ 0.16
MRPL55-218ENST00000366747 A0A087X0B3 334 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 SOD2P04179 222 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 BMP1P13497 986 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 NRIP1P48552 1158 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 POU5F1Q01860 360 aaKnown RBP16.01■□□□□ 0.15
MRPL55-218ENST00000366747 TFF2Q03403 129 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 ELAVL2Q12926 359 aaKnown RBP16.01■□□□□ 0.15
MRPL55-218ENST00000366747 FOXD4L6Q3SYB3 417 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-218ENST00000366747 SLFN12LQ6IEE8 588 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 FOXD4L3Q6VB84 417 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-218ENST00000366747 TMEM184AQ6ZMB5 413 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 STXBP4Q6ZWJ1 553 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 DYMQ7RTS9 669 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 ZNF720Q7Z2F6 126 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 CCDC65Q8IXS2 484 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 RNF168Q8IYW5 571 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-218ENST00000366747 PDILTQ8N807 584 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 HERC2P3Q9BVR0 1158 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 PLEKHA5Q9HAU0 1116 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 MARCH5Q9NX47 278 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 KLK14Q9P0G3 267 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 ANKFY1Q9P2R3 1169 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 USP25Q9UHP3 1055 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 EXOC7Q9UPT5 735 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 USP20Q9Y2K6 914 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 GDAQ9Y2T3 454 aa16.01■□□□□ 0.15
MRPL55-218ENST00000366747 PLXNA4Q9HCM2 1894 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 C2orf71A6NGG8 1288 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 PPP1R37O75864 691 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 EFEMP2O95967 443 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 C1RP00736 705 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 URODP06132 367 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 KCNE1P15382 129 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 NDUFV1P49821 464 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 HSP90AA2PQ14568 343 aaPredicted RBP16■□□□□ 0.15
MRPL55-218ENST00000366747 ADALQ6DHV7 355 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 ALKAL1Q6UXT8 129 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 PPFIBP1Q86W92 1011 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 SFR1Q86XK3 245 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 TMEM87AQ8NBN3 555 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 BCL7CQ8WUZ0 217 aaPredicted RBP16■□□□□ 0.15
MRPL55-218ENST00000366747 LEO1Q8WVC0 666 aaPredicted RBP16■□□□□ 0.15
MRPL55-218ENST00000366747 SNX27Q96L92 541 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 SPATA32Q96LK8 384 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 PPP1R10Q96QC0 940 aaKnown RBP16■□□□□ 0.15
MRPL55-218ENST00000366747 CNTN3Q9P232 1028 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 ADAM28Q9UKQ2 775 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 PRG3Q9Y2Y8 225 aaPredicted RBP16■□□□□ 0.15
MRPL55-218ENST00000366747 PCDHB13Q9Y5F0 798 aa16■□□□□ 0.15
MRPL55-218ENST00000366747 SF3B1O75533 1304 aaKnown RBP eCLIP15.99■□□□□ 0.152e-7■■■■■ 129.2
MRPL55-218ENST00000366747 TMEM189-UBE2V1I3L0A0 370 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 CSPG5O95196 566 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 CXCL14O95715 111 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 CLTAP09496 248 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 IDEP14735 1019 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 HOXB8P17481 243 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-218ENST00000366747 CMA1P23946 247 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 LTBRP36941 435 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 MATR3P43243 847 aaKnown RBP eCLIP15.99■□□□□ 0.15
MRPL55-218ENST00000366747 CREMQ03060 361 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 COASYQ13057 564 aa15.99■□□□□ 0.15
MRPL55-218ENST00000366747 SMAD4Q13485 552 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms