RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 NRBP2Q9NSY0 501 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 DZANK1Q9NVP4 752 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 FAM13BQ9NYF5 915 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 SPG21Q9NZD8 308 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 KCNH3Q9ULD8 1083 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 KIAA1024Q9UPX6 916 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 A0A087WZ62 844 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 A0A0U1RQF3 1178 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 STK25O00506 426 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 CXCL14O95715 111 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 PRR29P0C7W0 189 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 RFX1P22670 979 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 YWHABP31946 246 aaKnown RBP9.04□□□□□ -0.96
MRPL55-211ENST00000366738 STAT6P42226 847 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 SYKP43405 635 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 FAM160A1Q05DH4 1040 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 TBC1D8BQ0IIM8 1120 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 MCM6Q14566 821 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 LONRF3Q496Y0 759 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 ODR4Q5SWX8 454 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 CCDC73Q6ZRK6 1079 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 FAM43BQ6ZT52 329 aaPredicted RBP9.04□□□□□ -0.96
MRPL55-211ENST00000366738 CCDC149Q6ZUS6 474 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 C4orf19Q8IY42 314 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 ABI1Q8IZP0 508 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 BCL7CQ8WUZ0 217 aaPredicted RBP9.04□□□□□ -0.96
MRPL55-211ENST00000366738 RSAD2Q8WXG1 361 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 RUBCNQ92622 972 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 RAD54LQ92698 747 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 STAMQ92783 540 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 LPPQ93052 612 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 CALML4Q96GE6 196 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 CDK5RAP3Q96JB5 506 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 MAP7D2Q96T17 732 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 FDXACB1Q9BRP7 624 aaPredicted RBP9.04□□□□□ -0.96
MRPL55-211ENST00000366738 ZBP1Q9H171 429 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 ZSWIM4Q9H7M6 989 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 TBC1D17Q9HA65 648 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 BMP2KQ9NSY1 1161 aaPredicted RBP9.04□□□□□ -0.96
MRPL55-211ENST00000366738 RNF216Q9NWF9 866 aaPredicted RBP9.04□□□□□ -0.96
MRPL55-211ENST00000366738 SEPT9Q9UHD8 586 aaPredicted RBP9.04□□□□□ -0.96
MRPL55-211ENST00000366738 SERTAD1Q9UHV2 236 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 CA14Q9ULX7 337 aa9.04□□□□□ -0.96
MRPL55-211ENST00000366738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 HOXA2O43364 376 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 MAFO75444 373 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 ZNF202O95125 648 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 LYPLA2O95372 231 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 DCNP07585 359 aaKnown RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 SP9P0CG40 484 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 ZSCAN20P17040 1043 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 TMOD1P28289 359 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 CASP1P29466 404 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 RARRES1P49788 294 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 AFF1P51825 1210 aaKnown RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 SLC12A3P55017 1021 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 NPEPPSP55786 919 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 XKR3Q5GH77 459 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 RRAGBQ5VZM2 374 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 OTOP3Q7RTS5 596 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 VPS52Q8N1B4 723 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 SLC22A17Q8WUG5 538 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 NLRP7Q8WX94 980 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 LARP4BQ92615 738 aaKnown RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 ERCC4Q92889 916 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 ACSF2Q96CM8 615 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 RUSC1Q9BVN2 902 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 VN1R3Q9BXE9 311 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 NT5C3AQ9H0P0 336 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 BHMT2Q9H2M3 363 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 IFT122Q9HBG6 1241 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 DACT1Q9NYF0 836 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 CCDC39Q9UFE4 941 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 STK24Q9Y6E0 443 aa9.03□□□□□ -0.96
MRPL55-211ENST00000366738 CNOT1A5YKK6 2376 aaKnown RBP9.03□□□□□ -0.96
MRPL55-211ENST00000366738 FASNP49327 2511 aaKnown RBP9.02□□□□□ -0.96
MRPL55-211ENST00000366738 NPHP3-ACAD11A0A0J9YXS1 232 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 SPDYE4A6NLX3 237 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 SLC26A4O43511 780 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 N4BP1O75113 896 aaKnown RBP9.02□□□□□ -0.97
MRPL55-211ENST00000366738 PLA2G4BP0C869 781 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 MUTP22033 750 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 PHKA2P46019 1235 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 BCAR1P56945 870 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 CACNB1Q02641 598 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-211ENST00000366738 DHX8Q14562 1220 aaKnown RBP9.02□□□□□ -0.97
MRPL55-211ENST00000366738 ST3GAL2Q16842 350 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 ZC3H14Q6PJT7 736 aaKnown RBP9.02□□□□□ -0.97
MRPL55-211ENST00000366738 KRBA2Q6ZNG9 492 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 GPR149Q86SP6 731 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 RHPN2Q8IUC4 686 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 IQUBQ8NA54 791 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 SUMF1Q8NBK3 374 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 TMEM169Q96HH4 297 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 TRAIPQ9BWF2 469 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 MINDY3Q9H8M7 445 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 SFXN1Q9H9B4 322 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 SUCLA2Q9P2R7 463 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-211ENST00000366738 DNAJB4Q9UDY4 337 aa9.02□□□□□ -0.97
MRPL55-211ENST00000366738 STK17AQ9UEE5 414 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms