RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 RUFY4Q6ZNE9 571 aa0.75□□□□□ -2.29
RNU6-478P-201ENST00000363904 GALNT16Q8N428 558 aa0.75□□□□□ -2.29
RNU6-478P-201ENST00000363904 LNX2Q8N448 690 aa0.75□□□□□ -2.29
RNU6-478P-201ENST00000363904 HIPK4Q8NE63 616 aa0.75□□□□□ -2.29
RNU6-478P-201ENST00000363904 TFAP2BQ92481 460 aa0.75□□□□□ -2.29
RNU6-478P-201ENST00000363904 IL17RAQ96F46 866 aa0.75□□□□□ -2.29
RNU6-478P-201ENST00000363904 CCDC140Q96MF4 163 aa0.75□□□□□ -2.29
RNU6-478P-201ENST00000363904 FAM234AQ9H0X4 552 aa0.75□□□□□ -2.29
RNU6-478P-201ENST00000363904 PRAMEF22A3QJZ6 481 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 E5RJQ4 531 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 LDB3O75112 727 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 PRPF40AO75400 957 aaKnown RBP0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 CFBP00751 764 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 SCG5P05408 212 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 HNRNPCP07910 306 aaKnown RBP eCLIP0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 PSG1P11464 419 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 PRF1P14222 555 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 PLA2G2AP14555 144 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 ZNF16P17020 682 aaPredicted RBP0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 TNFRSF8P28908 595 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 CDC25AP30304 524 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 MRPL49Q13405 166 aaKnown RBP0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 DGKDQ16760 1214 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 PROSER3Q2NL68 480 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 NBPF8Q3BBV2 869 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 PRAMEF17Q5VTA0 474 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 FAM43AQ8N2R8 423 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 LILRB2Q8N423 598 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 ZNF843Q8N446 348 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 OR56A1Q8NGH5 318 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 FBXL20Q96IG2 436 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 BOD1Q96IK1 185 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 ZNF479Q96JC4 524 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 HERPUD2Q9BSE4 406 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 MLXIPQ9HAP2 919 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 MRPS18AQ9NVS2 196 aaKnown RBP0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 SERGEFQ9UGK8 458 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 TTC3P53804 2025 aa0.74□□□□□ -2.29
RNU6-478P-201ENST00000363904 LINC00473A8K010 186 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 SMIM22K7EJ46 135 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 MPPED1O15442 326 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 DDNO94850 711 aaPredicted RBP0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 TOMM40O96008 361 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 P4HBP07237 508 aaKnown RBP0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 MMEP08473 750 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 CASRP41180 1078 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 CXADRP78310 365 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 B3GNTL1Q67FW5 361 aaPredicted RBP0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 PP632Q6XCG6 107 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 COLGALT2Q8IYK4 626 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 OR5AN1Q8NGI8 311 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 SSH3Q8TE77 659 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 SH3RF2Q8TEC5 729 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 CCDC97Q96F63 343 aaPredicted RBP0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 PHACTR3Q96KR7 559 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 MRGPRX3Q96LB0 322 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 UIMC1Q96RL1 719 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 DUSP9Q99956 384 aaKnown RBP0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 DCTN5Q9BTE1 182 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 LGR4Q9BXB1 951 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 KRTAP4-1Q9BYQ7 146 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 GPR27Q9NS67 375 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 TMEM74BQ9NUR3 256 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 CRCT1Q9UGL9 99 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 SRPK3Q9UPE1 567 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 NPFFR2Q9Y5X5 522 aa0.73□□□□□ -2.29
RNU6-478P-201ENST00000363904 A0A0B4J293 547 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 SOWAHDA6NJG2 315 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 TISP43B9A030 160 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 PRRT4C9JH25 899 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 FAM47E-STBD1D6RA91 191 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 MSCO60682 206 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 DNAJB5O75953 348 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 ELANEP08246 267 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 ELFN1P0C7U0 828 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 KRT5P13647 590 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 HNRNPLP14866 589 aaKnown RBP eCLIP0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 ZNF10P21506 573 aaPredicted RBP0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 GZMKP49863 264 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 ANTXR2P58335 489 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 PSMD2Q13200 908 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 ZNF618Q5T7W0 954 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 TSHZ3Q63HK5 1081 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 KIAA0895LQ68EN5 471 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 DENND5AQ6IQ26 1287 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 KIAA1211LQ6NV74 962 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 ADAM5Q6NVV9 412 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 SUSD1Q6UWL2 747 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 BTNL9Q6UXG8 535 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 COLCA1Q6ZS62 124 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 LYG1Q8N1E2 194 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 RNF169Q8NCN4 708 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 NUDCD2Q8WVJ2 157 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 TFAP2CQ92754 450 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 CUL5Q93034 780 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 COQ8BQ96D53 544 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 DYDC2Q96IM9 177 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 TRIM55Q9BYV6 548 aa0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 REXO4Q9GZR2 422 aaKnown RBP0.72□□□□□ -2.29
RNU6-478P-201ENST00000363904 ENKD1Q9H0I2 346 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms