RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 CALML6Q8TD86 181 aa0.81□□□□□ -2.28
RNU6-228P-201ENST00000362700 CDCP1Q9H5V8 836 aa0.81□□□□□ -2.28
RNU6-228P-201ENST00000362700 TMEM74BQ9NUR3 256 aa0.81□□□□□ -2.28
RNU6-228P-201ENST00000362700 POGKQ9P215 609 aa0.81□□□□□ -2.28
RNU6-228P-201ENST00000362700 USP36Q9P275 1121 aaKnown RBP0.81□□□□□ -2.28
RNU6-228P-201ENST00000362700 PPARGC1AQ9UBK2 798 aaKnown RBP0.81□□□□□ -2.28
RNU6-228P-201ENST00000362700 APEX2Q9UBZ4 518 aa0.81□□□□□ -2.28
RNU6-228P-201ENST00000362700 YY2O15391 372 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 MPPED1O15442 326 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 LDHBP07195 334 aaKnown RBP0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 ELFN1P0C7U0 828 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 ZNF10P21506 573 aaPredicted RBP0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 HOXC12P31275 282 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 HERVK_113P62684 666 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 APOBRQ0VD83 1088 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 NBPF8Q3BBV2 869 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 BTNL9Q6UXG8 535 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 MAMDC2Q7Z304 686 aaPredicted RBP0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 XYLT1Q86Y38 959 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 PELI3Q8N2H9 469 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 OR5M3Q8NGP4 307 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 COQ8BQ96D53 544 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 BOD1Q96IK1 185 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 CAMK1GQ96NX5 476 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 MLXIPQ9HAP2 919 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 KCNQ5Q9NR82 932 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 ST3GAL5Q9UNP4 418 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 USP31Q70CQ4 1352 aa0.8□□□□□ -2.28
RNU6-228P-201ENST00000362700 ANKRD34BA5PLL1 514 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 TISP43B9A030 160 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 BCAR3O75815 825 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 CD19P15391 556 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 GRK2P25098 689 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 GRK3P35626 688 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 MRPL49Q13405 166 aaKnown RBP0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 PRAMEF17Q5VTA0 474 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 B3GNTL1Q67FW5 361 aaPredicted RBP0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 MIS18BP1Q6P0N0 1132 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 B4GALNT2Q8NHY0 566 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 TFAP2BQ92481 460 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 PPP1R14AQ96A00 147 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 IL17RAQ96F46 866 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 WDR92Q96MX6 357 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 PHAXQ9H814 394 aaKnown RBP0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 ZNRF3Q9ULT6 936 aa0.79□□□□□ -2.28
RNU6-228P-201ENST00000362700 LINC00473A8K010 186 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 PRRT4C9JH25 899 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 CFBP00751 764 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 SCG5P05408 212 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 HNRNPCP07910 306 aaKnown RBP eCLIP0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 ELANEP08246 267 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 EIF4A3P38919 411 aaKnown RBP0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 KCNJ6P48051 423 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 CXADRP78310 365 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 PRSS53Q2L4Q9 553 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 EFCAB12Q6NXP0 572 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 EP400NLQ6ZTU2 488 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 FAM43AQ8N2R8 423 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 SSH3Q8TE77 659 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 NUDCD2Q8WVJ2 157 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 TRIM55Q9BYV6 548 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 ENKD1Q9H0I2 346 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 UBP1Q9NZI7 540 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 SLC12A7Q9Y666 1083 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 ATP23Q9Y6H3 246 aa0.78□□□□□ -2.28
RNU6-228P-201ENST00000362700 DNAJB5O75953 348 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 CBLP22681 906 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 DGKDQ16760 1214 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 PDXDC1Q6P996 788 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 ZNF449Q6P9G9 518 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 CATSPERGQ6ZRH7 1159 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 OR56A1Q8NGH5 318 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 OR5AN1Q8NGI8 311 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 ATP2A3Q93084 1043 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 FBXL20Q96IG2 436 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 CCDC140Q96MF4 163 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 MRPL44Q9H9J2 332 aaKnown RBP0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 PDGFCQ9NRA1 345 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 PCDHB10Q9UN67 800 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 SRPK3Q9UPE1 567 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
RNU6-228P-201ENST00000362700 PRAMEF22A3QJZ6 481 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 MYO1FO00160 1098 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 SCAMP3O14828 347 aaKnown RBP0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 NAT2P11245 290 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 CDC25AP30304 524 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 ERVK11-1P61568 191 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 RBM39Q14498 530 aaKnown RBP0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 UBXN2BQ14CS0 331 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 ZNF618Q5T7W0 954 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 AGAP9Q5VTM2 703 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 RUFY4Q6ZNE9 571 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 DGLUCYQ7Z3D6 616 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 COLGALT2Q8IYK4 626 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 HIPK4Q8NE63 616 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 SH3RF2Q8TEC5 729 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 ZNF296Q8WUU4 475 aaPredicted RBP0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 BTN2A2Q8WVV5 523 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 MED30Q96HR3 178 aa0.76□□□□□ -2.29
RNU6-228P-201ENST00000362700 MRGPRX3Q96LB0 322 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms