RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 KDM4CQ9H3R0 1056 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 NMRK2Q9NPI5 230 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 ADARB2Q9NS39 739 aaKnown RBP9.75□□□□□ -0.85
TOP1-201ENST00000361337 SUCLA2Q9P2R7 463 aaPredicted RBP9.75□□□□□ -0.85
TOP1-201ENST00000361337 DBR1Q9UK59 544 aaKnown RBP9.75□□□□□ -0.85
TOP1-201ENST00000361337 RPTORQ8N122 1335 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 ESYT2A0FGR8 921 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 ANKRD63C9JTQ0 380 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 CCDC188H7C350 402 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 TXNDC9O14530 226 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 DNAJC8O75937 253 aaPredicted RBP9.75□□□□□ -0.85
TOP1-201ENST00000361337 AFPP02771 609 aaKnown RBP9.75□□□□□ -0.85
TOP1-201ENST00000361337 SLC30A9Q6PML9 568 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 C3orf20Q8ND61 904 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 GBP5Q96PP8 586 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 OSBPL1AQ9BXW6 950 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 SLITRK6Q9H5Y7 841 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 GCNT4Q9P109 453 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 COG5Q9UP83 839 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 SLC12A4Q9UP95 1085 aa9.75□□□□□ -0.85
TOP1-201ENST00000361337 GNA14O95837 355 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 SLC12A3P55017 1021 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 JAM2P57087 298 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 DR1Q01658 176 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 COG2Q14746 738 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 MTERF2Q49AM1 385 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 FAM47CQ5HY64 1035 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 DUPD1Q68J44 220 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 GPC2Q8N158 579 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 CCDC26Q8TAB7 109 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 CCDC97Q96F63 343 aaPredicted RBP9.74□□□□□ -0.85
TOP1-201ENST00000361337 P2RX7Q99572 595 aaKnown RBP9.74□□□□□ -0.85
TOP1-201ENST00000361337 REEP2Q9BRK0 252 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 PCIF1Q9H4Z3 704 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 ARFGEF1Q9Y6D6 1849 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 IQCA1LA6NCM1 817 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 TMEM110-MUSTN1A8MSY1 372 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 GRIN3BO60391 1043 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 LRRN2O75325 713 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 MMP13P45452 471 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 VPS41P49754 854 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 PMS2P54278 862 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 USP4Q13107 963 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 TMED1Q13445 227 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 VGLL4Q14135 290 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 OTUD6AQ7L8S5 288 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 ZC3H3Q8IXZ2 948 aaKnown RBP9.74□□□□□ -0.85
TOP1-201ENST00000361337 SNRNP27Q8WVK2 155 aaKnown RBP9.74□□□□□ -0.85
TOP1-201ENST00000361337 SLC35C1Q96A29 364 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 GPBP1L1Q9HC44 474 aaPredicted RBP9.74□□□□□ -0.85
TOP1-201ENST00000361337 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 TCRBV7S2A1N4TA0A589 114 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 TMEM150BA6NC51 233 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 ZBTB39O15060 712 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 XRCC5P13010 732 aaKnown RBP9.74□□□□□ -0.85
TOP1-201ENST00000361337 RPS12P25398 132 aaKnown RBP9.74□□□□□ -0.85
TOP1-201ENST00000361337 PIGWQ7Z7B1 504 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 MIPOL1Q8TD10 442 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 AGAP11Q8TF27 550 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 KRT35Q92764 455 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 CCDC127Q96BQ5 260 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 ERP44Q9BS26 406 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 THAP2Q9H0W7 228 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
TOP1-201ENST00000361337 UBOX5O94941 541 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 PRKCIP41743 596 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 ZNF131P52739 623 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 BACE1P56817 501 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 PTENP60484 403 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 MTMR1Q13613 665 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 GIT2Q14161 759 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 TTC27Q6P3X3 843 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 FAM160B2Q86V87 743 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 CATSPER3Q86XQ3 398 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 JAMLQ86YT9 394 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 HOMEZQ8IX15 550 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 SCYL3Q8IZE3 742 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 DYDC2Q96IM9 177 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 DDX23Q9BUQ8 820 aaKnown RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 GRHL1Q9NZI5 618 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 FEM1BQ9UK73 627 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 AMFRQ9UKV5 643 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 TMX2Q9Y320 296 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 ASTN1O14525 1302 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 KIAA0391O15091 583 aaKnown RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 RTN2O75298 545 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 RPL21P46778 160 aaKnown RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 CLK2P49760 499 aaKnown RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 HIRAP54198 1017 aaPredicted RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 GABPAQ06546 454 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 KNOP1Q1ED39 458 aaKnown RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 KIAA1755Q5JYT7 1200 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 FOXR2Q6PJQ5 311 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 POP1Q99575 1024 aaKnown RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 PABPC3Q9H361 631 aaKnown RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 ATP6V0A4Q9HBG4 840 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
TOP1-201ENST00000361337 DAAM1Q9Y4D1 1078 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 SLC4A7Q9Y6M7 1214 aa9.73□□□□□ -0.85
TOP1-201ENST00000361337 CCL15-CCL14A0A0B4J2E2 113 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms