RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 LINC01553A4QN01 128 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 HMGB1P1B2RPK0 211 aaPredicted RBP8.35□□□□□ -1.07
CCL28-201ENST00000361115 IFIT3O14879 490 aaKnown RBP8.35□□□□□ -1.07
CCL28-201ENST00000361115 IPO7O95373 1038 aaKnown RBP8.35□□□□□ -1.07
CCL28-201ENST00000361115 F2P00734 622 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 TSPY3P0CV98 308 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 TSPY8P0CW00 308 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 SNHG28P0DPA3 235 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 PEX19P40855 299 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 SLC8A3P57103 927 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 MYO1EQ12965 1108 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 ZNF174Q15697 407 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 TRIM71Q2Q1W2 868 aaKnown RBP8.35□□□□□ -1.07
CCL28-201ENST00000361115 LACTB2Q53H82 288 aaPredicted RBP8.35□□□□□ -1.07
CCL28-201ENST00000361115 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 IFT20Q8IY31 132 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 MREGQ8N565 214 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 NSMCE1Q8WV22 266 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 WASF1Q92558 559 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 TATDN2Q93075 761 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 HVCN1Q96D96 273 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 VWCEQ96DN2 955 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 ZKSCAN3Q9BRR0 538 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 NUP58Q9BVL2 599 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 KIAA1522Q9P206 1035 aaPredicted RBP8.35□□□□□ -1.07
CCL28-201ENST00000361115 ZSWIM5Q9P217 1185 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 CNOT8Q9UFF9 292 aaKnown RBP8.35□□□□□ -1.07
CCL28-201ENST00000361115 BAIAP2L1Q9UHR4 511 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 SLC12A6Q9UHW9 1150 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 NUB1Q9Y5A7 615 aa8.35□□□□□ -1.07
CCL28-201ENST00000361115 BAZ2BQ9UIF8 2168 aaKnown RBP8.35□□□□□ -1.07
CCL28-201ENST00000361115 SRRM3A6NNA2 597 aaPredicted RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 LOC730098B7Z3J9 87 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 DYNC1LI2O43237 492 aaPredicted RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 TRAPPC3O43617 180 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 PRLRP16471 622 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 SLC1A4P43007 532 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 SKIV2LQ15477 1246 aaKnown RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 MFSD4BQ5TF39 518 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 ZNF658Q5TYW1 1059 aaPredicted RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 SYDE2Q5VT97 1194 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 CCDC170Q8IYT3 715 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 PARD3BQ8TEW8 1205 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 CLP1Q92989 425 aaKnown RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 NECTIN4Q96NY8 510 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 ARMT1Q9H993 441 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 SLC39A2Q9NP94 309 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 CCPG1Q9ULG6 757 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 MRPL11Q9Y3B7 192 aaKnown RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 FRMPD4Q14CM0 1322 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 COQ9O75208 318 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 ACRP10323 421 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 TCP1P17987 556 aaKnown RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 TRIM21P19474 475 aaKnown RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 PAK2Q13177 524 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 KCNB1Q14721 858 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 KCTD19Q17RG1 926 aaPredicted RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 PLEKHG4Q58EX7 1191 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 CXCL17Q6UXB2 119 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 NSUN6Q8TEA1 469 aaKnown RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 CCT6BQ92526 530 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 TLR10Q9BXR5 811 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 RAVER2Q9HCJ3 691 aaKnown RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 ZNHIT6Q9NWK9 470 aaKnown RBP8.34□□□□□ -1.07
CCL28-201ENST00000361115 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.34□□□□□ -1.07
CCL28-201ENST00000361115 PCDHA13Q9Y5I0 950 aa8.34□□□□□ -1.07
CCL28-201ENST00000361115 hCG_1642624A0A1W2PR95 340 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 ANKRD33BA6NCL7 494 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 TPD52L2O43399 206 aaKnown RBP8.34□□□□□ -1.08
CCL28-201ENST00000361115 DNAJC8O75937 253 aaPredicted RBP8.34□□□□□ -1.08
CCL28-201ENST00000361115 RPN1P04843 607 aaKnown RBP8.34□□□□□ -1.08
CCL28-201ENST00000361115 MMP3P08254 477 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 MYL3P08590 195 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 ZBED6P86452 979 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 SIGLEC14Q08ET2 396 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 IFFO1Q0D2I5 559 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 CDC37Q16543 378 aaPredicted RBP8.34□□□□□ -1.08
CCL28-201ENST00000361115 RTN1Q16799 776 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 ASPRV1Q53RT3 343 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 HIBCHQ6NVY1 386 aaPredicted RBP8.34□□□□□ -1.08
CCL28-201ENST00000361115 CCDC62Q6P9F0 684 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 BZW1Q7L1Q6 419 aaKnown RBP8.34□□□□□ -1.08
CCL28-201ENST00000361115 TRIM22Q8IYM9 498 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 CACNA2D3Q8IZS8 1091 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 RASGRP4Q8TDF6 673 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 RAPGEF5Q92565 580 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 CUL5Q93034 780 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 RSRC1Q96IZ7 334 aaKnown RBP8.34□□□□□ -1.08
CCL28-201ENST00000361115 IFIH1Q9BYX4 1025 aaKnown RBP8.34□□□□□ -1.08
CCL28-201ENST00000361115 CD207Q9UJ71 328 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 L3MBTL1Q9Y468 752 aa8.34□□□□□ -1.08
CCL28-201ENST00000361115 C5orf60A6NFR6 353 aa8.33□□□□□ -1.08
CCL28-201ENST00000361115 ENO4A6NNW6 628 aa8.33□□□□□ -1.08
CCL28-201ENST00000361115 GSG1L2A8MUP6 293 aa8.33□□□□□ -1.08
CCL28-201ENST00000361115 DPYSL4O14531 572 aa8.33□□□□□ -1.08
CCL28-201ENST00000361115 BUB1BO60566 1050 aaPredicted RBP8.33□□□□□ -1.08
CCL28-201ENST00000361115 DEXIO95424 95 aa8.33□□□□□ -1.08
CCL28-201ENST00000361115 NBL1P41271 181 aa8.33□□□□□ -1.08
CCL28-201ENST00000361115 LIFRP42702 1097 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms