RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CDR2Q01850 454 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 PPARAQ07869 468 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 BIRC2Q13490 618 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 SLC10A5Q5PT55 438 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 FAM83BQ5T0W9 1011 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 UGT2A3Q6UWM9 527 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 ARHGEF18Q6ZSZ5 1173 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 CENPUQ71F23 418 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 SH2D3CQ8N5H7 860 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 TERB1Q8NA31 727 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 ZBTB8BQ8NAP8 495 aaPredicted RBP4.84□□□□□ -1.64
PTPN22-201ENST00000359785 LMO3Q8TAP4 145 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 PLEKHO2Q8TD55 490 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 OXER1Q8TDS5 423 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 USP6NLQ92738 828 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 TCEANC2Q96MN5 208 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 RTFDC1Q9BY42 306 aaPredicted RBP4.84□□□□□ -1.64
PTPN22-201ENST00000359785 TMEM60Q9H2L4 133 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 SEL1LQ9UBV2 794 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF180Q9UJW8 692 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 UTP11Q9Y3A2 253 aaKnown RBP4.84□□□□□ -1.64
PTPN22-201ENST00000359785 SAMM50Q9Y512 469 aa4.84□□□□□ -1.64
PTPN22-201ENST00000359785 SOWAHBA6NEL2 793 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CREB3O43889 395 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TFRCP02786 760 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZFXP17010 805 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 KLRC1P26715 233 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 GTF2H1P32780 548 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF76P36508 570 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 NEK3P51956 506 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ACTR3P61158 418 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MAGOHP61326 146 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 PFKPQ01813 784 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ALCAMQ13740 583 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 RFTN1Q14699 578 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 RPS6KA1Q15418 735 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CNPY1Q3B7I2 92 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 Q4G0T1 1027 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 LIN52Q52LA3 116 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 LRRC38Q5VT99 294 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 HIBCHQ6NVY1 386 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 B3GNT9Q6UX72 402 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 COPS6Q7L5N1 327 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZCCHC9Q8N567 271 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 FBF1Q8TES7 1133 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 DNAJC9Q8WXX5 260 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MAGOHBQ96A72 148 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZNF184Q99676 751 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MYD88Q99836 296 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MRPS26Q9BYN8 205 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ASCC2Q9H1I8 757 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MLXIPQ9HAP2 919 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 KRT82Q9NSB4 513 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ABCF3Q9NUQ8 709 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 FGFR1OP2Q9NVK5 253 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 NMRK1Q9NWW6 199 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MAD2L2Q9UI95 211 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 APPL1Q9UKG1 709 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CHKBQ9Y259 395 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 DRG1Q9Y295 367 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 COQ4Q9Y3A0 265 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 C2CD2Q9Y426 696 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 EMSYQ7Z589 1322 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ANKRD62A6NC57 917 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 RNF103O00237 685 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 RGS13O14921 159 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CAND2O75155 1236 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 OR52Z1P0C646 297 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 GNAT1P11488 350 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 SKIP12755 728 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 PORP16435 677 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CIITAP33076 1130 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TXKP42681 527 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ETV4P43268 484 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 HSPA13P48723 471 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 HPCAP84074 193 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 SCARF1Q14162 830 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZRSR2Q15696 482 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 PDCD4Q53EL6 469 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 PCNX4Q63HM2 1172 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TIFABQ6ZNK6 161 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 MARK2Q7KZI7 788 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 PODNQ7Z5L7 613 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TRIM74Q86UV6 250 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TRIM73Q86UV7 250 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 TRABD2AQ86V40 505 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 SFR1Q86XK3 245 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 LSMEM2Q8N112 164 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 SAMD3Q8N6K7 520 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 GPATCH11Q8N954 259 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 B4GALNT2Q8NHY0 566 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 ZCRB1Q8TBF4 217 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 RBM33Q96EV2 1170 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 EDC3Q96F86 508 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 AIFM3Q96NN9 605 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CATSPER2Q96P56 530 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 HNRNPABQ99729 332 aaKnown RBP4.83□□□□□ -1.64
PTPN22-201ENST00000359785 CCT7Q99832 543 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 STK33Q9BYT3 514 aa4.83□□□□□ -1.64
PTPN22-201ENST00000359785 NT5C3AQ9H0P0 336 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms