RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PID1Q7Z2X4 250 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 BPIFA3Q9BQP9 254 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 ANO9A1A5B4 782 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 FCER1AP12319 257 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 ERFP50548 548 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 SIRT2Q8IXJ6 389 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 PLEKHA5Q9HAU0 1116 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 ARIH2O95376 493 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 ENO1P06733 434 aaKnown RBP19.42■□□□□ 0.7
SHANK1-202ENST00000359082 GPSM2P81274 684 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 EIF3EP60228 445 aaKnown RBP19.42■□□□□ 0.7
SHANK1-202ENST00000359082 ADNPQ9H2P0 1102 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 PVALEFA0A1B0GWK0 134 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 CHUKO15111 745 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 TDP2O95551 362 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 PSMC5P62195 406 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 AARS2Q5JTZ9 985 aaKnown RBP19.41■□□□□ 0.7
SHANK1-202ENST00000359082 GLYCTKQ8IVS8 523 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 ATP6V1G3Q96LB4 118 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 ADAM33Q9BZ11 813 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 TEX33O43247 280 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 DMC1Q14565 340 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 AGO2Q9UKV8 859 aaKnown RBP19.41■□□□□ 0.7
SHANK1-202ENST00000359082 TRAF3IP3Q9Y228 551 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 IL10P22301 178 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 NEK2P51955 445 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 SYTL3Q4VX76 610 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 COBLL1Q53SF7 1204 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 SYNDIG1Q9H7V2 258 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 BFARQ9NZS9 450 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 H7C1W4 665 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 OTUD5Q96G74 571 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 SNAP23O00161 211 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 CYP26A1O43174 497 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 DCUN1D1Q96GG9 259 aa19.41■□□□□ 0.7
SHANK1-202ENST00000359082 MROH7-TTC4A0A0A0MT08 1334 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 ARHGAP10A1A4S6 786 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 FAM187AA6NFU0 413 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 ZFXP17010 805 aaPredicted RBP19.4■□□□□ 0.7
SHANK1-202ENST00000359082 YAF2Q8IY57 180 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 BARHL2Q9NY43 387 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 TJP2Q9UDY2 1190 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 PCDHGB4Q9UN71 923 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 ASMTLO95671 621 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 NUP93Q8N1F7 819 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 SH3TC2Q8TF17 1288 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 ZCCHC11Q5TAX3 1644 aaKnown RBP19.4■□□□□ 0.7
SHANK1-202ENST00000359082 TPI1P60174 286 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 CYTH1Q15438 398 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 TRMT2AQ8IZ69 625 aaKnown RBP19.4■□□□□ 0.7
SHANK1-202ENST00000359082 ELMO2Q96JJ3 720 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 AGPAT1Q99943 283 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 VCAM1P19320 739 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 SPDYAQ5MJ70 313 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 USP33Q8TEY7 942 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 TLR2O60603 784 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 MAPRE2Q15555 327 aa19.4■□□□□ 0.7
SHANK1-202ENST00000359082 RARS2Q5T160 578 aaKnown RBP19.4■□□□□ 0.7
SHANK1-202ENST00000359082 SPATA2LQ8IUW3 424 aaPredicted RBP19.4■□□□□ 0.7
SHANK1-202ENST00000359082 PCYT1AP49585 367 aa19.39■□□□□ 0.7
SHANK1-202ENST00000359082 SEPT12Q8IYM1 358 aa19.39■□□□□ 0.7
SHANK1-202ENST00000359082 HPS4Q9NQG7 708 aa19.39■□□□□ 0.7
SHANK1-202ENST00000359082 CCDC78A2IDD5 438 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 HSPA9P38646 679 aaKnown RBP19.39■□□□□ 0.69
SHANK1-202ENST00000359082 SESN2P58004 480 aaPredicted RBP19.39■□□□□ 0.69
SHANK1-202ENST00000359082 KIZQ2M2Z5 673 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 PKN3Q6P5Z2 889 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 CPDO75976 1380 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 CCDC22O60826 627 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 GFAPP14136 432 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 MFN1Q8IWA4 741 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 FMR1NBQ8N0W7 255 aaPredicted RBP19.39■□□□□ 0.69
SHANK1-202ENST00000359082 RAB42Q8N4Z0 105 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 AGAP3Q96P47 875 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 HMOX2P30519 316 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 PDAP1Q13442 181 aaKnown RBP19.39■□□□□ 0.69
SHANK1-202ENST00000359082 TJAP1Q5JTD0 557 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 KDSRQ06136 332 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 QRICH1Q2TAL8 776 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 OTUB1Q96FW1 271 aaPredicted RBP19.39■□□□□ 0.69
SHANK1-202ENST00000359082 ZC3H4Q9UPT8 1303 aaKnown RBP19.39■□□□□ 0.69
SHANK1-202ENST00000359082 PREX2Q70Z35 1606 aa19.39■□□□□ 0.69
SHANK1-202ENST00000359082 GGPS1O95749 300 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 HMBSP08397 361 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 CARSP49589 748 aaKnown RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 HIF1AQ16665 826 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 WDR48Q8TAF3 677 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 ZNF229Q9UJW7 825 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 MAGI3Q5TCQ9 1506 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 TTC26A0AVF1 554 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 FOXN1O15353 648 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 CCDC144BQ3MJ40 725 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 STX19Q8N4C7 294 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 MS4A14Q96JA4 679 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 CD209Q9NNX6 404 aa19.38■□□□□ 0.69
SHANK1-202ENST00000359082 MAP3K20Q9NYL2 800 aaKnown RBP19.38■□□□□ 0.69
SHANK1-202ENST00000359082 MBD5Q9P267 1494 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms