RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 ZNF662Q6ZS27 426 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 TMEM143Q96AN5 459 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 BORCS6Q96GS4 357 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 FNBP1Q96RU3 617 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 PCYT2Q99447 389 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 SH2D3AQ9BRG2 576 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 NFKBIZQ9BYH8 718 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 PPP1R12CQ9BZL4 782 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 BCAS3Q9H6U6 928 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 AIPL1Q9NZN9 384 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 DOCK5Q9H7D0 1870 aa11.66□□□□□ -0.54
TRAPPC4-201ENST00000359005 MCM3APO60318 1980 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 LRRC53A6NM62 1247 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 H3BRB1 525 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 ZEB2O60315 1214 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 B4GALT4O60513 344 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 ZC3H11AO75152 810 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 RPLP2P05387 115 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 GNAT1P11488 350 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 UCHL3P15374 230 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 CSF2RAP15509 400 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 GLRA2P23416 452 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 PON1P27169 355 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 CASQ1P31415 396 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 CASP4P49662 377 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 MXI1P50539 228 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 TUBB4BP68371 445 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 GOLGA8FQ08AF8 430 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 GOLGA8DPQ0D2H9 430 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 KCNMA1Q12791 1236 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 RAPGEF1Q13905 1077 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 TMEM132AQ24JP5 1023 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 C17orf53Q8N3J3 647 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 PRPF31Q8WWY3 499 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 ZNF592Q92610 1267 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 FBXL18Q96ME1 805 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 FAM161BQ96MY7 647 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 STK33Q9BYT3 514 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 PCIF1Q9H4Z3 704 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 TMEM8AQ9HCN3 771 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 TRMT13Q9NUP7 481 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 AGPAT5Q9NUQ2 364 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 PRMT7Q9NVM4 692 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 SUCLA2Q9P2R7 463 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 APEX2Q9UBZ4 518 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 AGO2Q9UKV8 859 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 R3HCC1Q9Y3T6 440 aaKnown RBP11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 STYXL1Q9Y6J8 313 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 UNC80Q8N2C7 3258 aa11.65□□□□□ -0.54
TRAPPC4-201ENST00000359005 SPTBN5Q9NRC6 3674 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 A6NJR5 290 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 GRXCR1A8MXD5 290 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 CLDN3O15551 220 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 TOM1L1O75674 476 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 MYL3P08590 195 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 HOXD8P13378 290 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 MARK3P27448 753 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 POU5F1Q01860 360 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 KLHL30Q0D2K2 578 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 LAMTOR4Q0VGL1 99 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 IFI16Q16666 785 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 CDCA2Q69YH5 1023 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 MFSD5Q6N075 450 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 GPR153Q6NV75 609 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 EFCAB12Q6NXP0 572 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 TRIM65Q6PJ69 517 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 TOGARAM2Q6ZUX3 1019 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 KSR1Q8IVT5 923 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 REXO1L1PQ8IX06 675 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 METTL13Q8N6R0 699 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 RDH13Q8NBN7 331 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 AFG1LQ8WV93 481 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 CALR3Q96L12 384 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 MFSD14AQ96MC6 490 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 GUCD1Q96NT3 240 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.553e-6■■□□□ 14
TRAPPC4-201ENST00000359005 CBWD1Q9BRT8 395 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 CRACR2AQ9BSW2 395 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 TCHPQ9BT92 498 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 MSTO1Q9BUK6 570 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 INO80BQ9C086 356 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 TTYH1Q9H313 450 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
TRAPPC4-201ENST00000359005 CUL9Q8IWT3 2517 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 ATP8B3O60423 1300 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 MMP3P08254 477 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 CYP2C9P11712 490 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 INSRRP14616 1297 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 KLK7P49862 253 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 MFAP3P55082 362 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 CCL23P55773 120 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 GNG11P61952 73 aa11.63□□□□□ -0.55
TRAPPC4-201ENST00000359005 FPGSQ05932 587 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms