RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MORF4L1Q9UBU8 362 aa13.67□□□□□ -0.22
GGPS1-202ENST00000358966 GTPBP10A4D1E9 387 aaKnown RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 LGALS2P05162 132 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 SMPD1P17405 629 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 CXCR5P32302 372 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 OSTNP61366 133 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 LAMTOR4Q0VGL1 99 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 STRN3Q13033 797 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 GRB14Q14449 540 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 TAF1CQ15572 869 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 SLC18A3Q16572 532 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 FAM110CQ1W6H9 321 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 GLYCTKQ8IVS8 523 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 MICALL1Q8N3F8 863 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 PPM1KQ8N3J5 372 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 SLC20A1Q8WUM9 679 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 DHX38Q92620 1227 aaKnown RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 MINDY3Q9H8M7 445 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 SSU72P8A0A1W2PR75 194 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 LGR5O75473 907 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 NAMPTP43490 491 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 GCLCP48506 637 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 CYP24A1Q07973 514 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 KCTD19Q17RG1 926 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 KIAA0753Q2KHM9 967 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 EPC2Q52LR7 807 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 BRDTQ58F21 947 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 TADA2BQ86TJ2 420 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 SAPCD2Q86UD0 394 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 GPD1LQ8N335 351 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 OLIG1Q8TAK6 271 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 ZNF516Q92618 1163 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 MAF1Q9H063 256 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 SMARCAL1Q9NZC9 954 aa13.66□□□□□ -0.22
GGPS1-202ENST00000358966 CHORDC1Q9UHD1 332 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 PACSIN2Q9UNF0 486 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-202ENST00000358966 LCA5LO95447 670 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 TBC1D8O95759 1140 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 IQCF3P0C7M6 154 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 INSRRP14616 1297 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 RTP1P59025 263 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 SPOPLQ6IQ16 392 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 EFCAB12Q6NXP0 572 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 CRELD2Q6UXH1 353 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-202ENST00000358966 SV2AQ7L0J3 742 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 PLEKHH3Q7Z736 793 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 EFCAB13Q8IY85 973 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 EHBP1Q8NDI1 1231 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 TAS2R14Q9NYV8 317 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 EHD2Q9NZN4 543 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 DDX3XO00571 662 aaKnown RBP eCLIP13.65□□□□□ -0.227e-7■■■■□ 20.7
GGPS1-202ENST00000358966 VTNP04004 478 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 SOX5P35711 763 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 LNX1Q8TBB1 728 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-202ENST00000358966 SYN2Q92777 582 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-202ENST00000358966 TATDN2Q93075 761 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 KREMEN1Q96MU8 473 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 TINF2Q9BSI4 451 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 MSTO1Q9BUK6 570 aa13.65□□□□□ -0.22
GGPS1-202ENST00000358966 SUCLA2Q9P2R7 463 aaPredicted RBP13.65□□□□□ -0.22
GGPS1-202ENST00000358966 AGO2Q9UKV8 859 aaKnown RBP13.65□□□□□ -0.22
GGPS1-202ENST00000358966 ADCY3O60266 1144 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 TADA3O75528 432 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 CYP2B6P20813 491 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 AMPD2Q01433 879 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 FBXL18Q96ME1 805 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
GGPS1-202ENST00000358966 INO80B-WBP1J3KQ70 363 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 TNNI1P19237 187 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 PAX7P23759 505 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 RFC5P40937 340 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 TMEM62Q0P6H9 643 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 MYBPC2Q14324 1141 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 KCNV1Q6PIU1 500 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 GIMAP7Q8NHV1 300 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 U2AF1L4Q8WU68 220 aaKnown RBP13.64□□□□□ -0.23
GGPS1-202ENST00000358966 PSPC1Q8WXF1 523 aaKnown RBP13.64□□□□□ -0.23
GGPS1-202ENST00000358966 KAT2BQ92831 832 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 INO80BQ9C086 356 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-202ENST00000358966 NUCKS1Q9H1E3 243 aaKnown RBP13.64□□□□□ -0.23
GGPS1-202ENST00000358966 SMARCAD1Q9H4L7 1026 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 NAGPAQ9UK23 515 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 GINS2Q9Y248 185 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 SLC45A1Q9Y2W3 748 aa13.64□□□□□ -0.23
GGPS1-202ENST00000358966 FTCDO95954 541 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 TUBB4AP04350 444 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 ABCB4P21439 1286 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 STAT1P42224 750 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 ALKBH5Q6P6C2 394 aaKnown RBP13.63□□□□□ -0.23
GGPS1-202ENST00000358966 SLC17A8Q8NDX2 589 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 STK33Q9BYT3 514 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 ZSWIM8A7E2V4 1837 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 ATP8B1O43520 1251 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 STRNO43815 780 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 MSCO60682 206 aa13.63□□□□□ -0.23
GGPS1-202ENST00000358966 GH1P01241 217 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms