RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ST13P50502 369 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 USP11P51784 963 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 CACNB1Q02641 598 aaPredicted RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 B3GNT6Q6ZMB0 384 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 LRRC74BQ6ZQY2 392 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ERICH1Q86X53 443 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 MRPL47Q9HD33 250 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 SYBUQ9NX95 663 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 MROH7Q68CQ1 1323 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 TDRD6O60522 2096 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 RPL5P46777 297 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 CROCCP3Q8IVE0 287 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 ZFYVE19Q96K21 471 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 EYA3Q99504 573 aa6.42□□□□□ -1.38
VPS13B-203ENST00000358544 DDX18Q9NVP1 670 aaKnown RBP6.42□□□□□ -1.38
VPS13B-203ENST00000358544 A8MXQ7 604 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 SLC16A3O15427 465 aaKnown RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 POLGP54098 1239 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 MCL1Q07820 350 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 RSPH3Q86UC2 560 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 LRRC6Q86X45 466 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 RBBP8NLQ8NC74 664 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 CNDP1Q96KN2 507 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 BTBD10Q9BSF8 475 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 KPNA7A9QM74 516 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 AIM2O14862 343 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PLA2G4BP0C869 781 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 CIITAP33076 1130 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 HERVK_113P62684 666 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PTK2Q05397 1052 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PABPC4Q13310 644 aaKnown RBP eCLIP6.41□□□□□ -1.383e-6■■■■□ 26.6
VPS13B-203ENST00000358544 DMP1Q13316 513 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PICALMQ13492 652 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PROCA1Q8NCQ7 364 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 SPATA17Q96L03 361 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 ACCSQ96QU6 501 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 BRIP1Q9BX63 1249 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 NOL6Q9H6R4 1146 aaKnown RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 FAM153BP0C7A2 387 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 TAC1P20366 129 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 NCALDP61601 193 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 FAM153CQ494X1 144 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 FBXL13Q8NEE6 735 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 INPP5DQ92835 1189 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 AGPAT5Q9NUQ2 364 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 SP100P23497 879 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 BNC2Q6ZN30 1099 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 IP6K1Q92551 441 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 ZBTB18Q99592 522 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 FOXP3Q9BZS1 431 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 CCDC90BQ9GZT6 254 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 MED14O60244 1454 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 P4HA1P13674 534 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PPARGP37231 505 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 CDK17Q00537 523 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 IFRD2Q12894 506 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 LPIN1Q14693 890 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 ZBTB41Q5SVQ8 909 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 EXOC8Q8IYI6 725 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 ADGRA3Q8IWK6 1321 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PSMG1O95456 288 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 TTLL1O95922 423 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 RSBN1Q5VWQ0 802 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PCNX4Q63HM2 1172 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 RNF34Q969K3 372 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 GPR101Q96P66 508 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 GDF3Q9NR23 364 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 COPG2Q9UBF2 871 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 NACAE9PAV3 2078 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 ABCA7Q8IZY2 2146 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PPP1R3GB7ZBB8 358 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PSMC3P17980 439 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 GPC5P78333 572 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 SP4Q02446 784 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 EFHC1Q5JVL4 640 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 LPCAT2Q7L5N7 544 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 SLC35G2Q8TBE7 412 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 FCHO1O14526 889 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 WDR47O94967 919 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PSMA2P25787 234 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 ITGA8P53708 1063 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 KLC2Q9H0B6 622 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 ZCWPW1Q9H0M4 648 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 KIF17Q9P2E2 1029 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 DAPK2Q9UIK4 370 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 UBE4BO95155 1302 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 VCPP55072 806 aaKnown RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 LRMDAQ9H2I8 198 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 A0A1W2PQJ5 194 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 WBP4O75554 376 aaKnown RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 POLR2BP30876 1174 aaKnown RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 LVRNQ6Q4G3 990 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 JADE3Q92613 823 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 BHMT2Q9H2M3 363 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 ZC3H7BQ9UGR2 993 aaKnown RBP6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PHTF1Q9UMS5 762 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 PI4K2BG5E9Z4 385 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 hCG_1984214I3L0E3 225 aa6.41□□□□□ -1.38
VPS13B-203ENST00000358544 TNNC2P02585 160 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms